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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS12 component
Gene families : OG0002902 (Archaeplastida) Phylogenetic Tree(s): OG0002902_tree ,
OG_05_0002767 (LandPlants) Phylogenetic Tree(s): OG_05_0002767_tree ,
OG_06_0003564 (SeedPlants) Phylogenetic Tree(s): OG_06_0003564_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01034219001 | |
| Cluster | HCCA: Cluster_60 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00095p00079060 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | Archaeplastida | |
| AT1G15930 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.17 | Archaeplastida | |
| AT2G32060 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.23 | Archaeplastida | |
| Cpa|evm.model.tig00020903.34 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.23 | Archaeplastida | |
| Cre04.g214503 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.23 | Archaeplastida | |
| GSVIVT01023591001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | Archaeplastida | |
| Gb_19269 | No alias | component RPS12 of SSU proteome | 0.12 | Archaeplastida | |
| LOC_Os07g05580.1 | No alias | component RPS12 of SSU proteome | 0.22 | Archaeplastida | |
| LOC_Os07g12650.1 | No alias | component RPS12 of SSU proteome | 0.14 | Archaeplastida | |
| MA_119564g0010 | No alias | no hits & (original description: none) | 0.23 | Archaeplastida | |
| MA_16920g0010 | No alias | component RPS12 of SSU proteome | 0.11 | Archaeplastida | |
| Mp7g11470.1 | No alias | component RPS12 of SSU proteome | 0.25 | Archaeplastida | |
| Pp3c12_3210V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.12 | Archaeplastida | |
| Pp3c16_7980V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.2 | Archaeplastida | |
| Pp3c17_3630V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.15 | Archaeplastida | |
| Smo441919 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | Archaeplastida | |
| Solyc01g103800.3.1 | No alias | component RPS12 of SSU proteome | 0.23 | Archaeplastida | |
| Solyc03g083290.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc12g042650.2.1 | No alias | component RPS12 of SSU proteome | 0.28 | Archaeplastida | |
| Zm00001e009380_P001 | No alias | component RPS12 of SSU proteome | 0.25 | Archaeplastida | |
| Zm00001e027021_P002 | No alias | component RPS12 of SSU proteome | 0.04 | Archaeplastida | |
| Zm00001e032507_P001 | No alias | component RPS12 of SSU proteome | 0.07 | Archaeplastida | |
| Zm00001e033149_P001 | No alias | component RPS12 of SSU proteome | 0.2 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| CC | GO:0005730 | nucleolus | IEP | Neighborhood |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Neighborhood |
| CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| CC | GO:0031968 | organelle outer membrane | IEP | Neighborhood |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
| CC | GO:0098805 | whole membrane | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 114 | 207 |
| No external refs found! |