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  5. AMTR_s00045p00148030

AMTR_s00045p00148030 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.159

Description : Cell wall.pectin.modification and degradation.pectin acetylesterase


Gene families : OG0000465 (Archaeplastida) Phylogenetic Tree(s): OG0000465_tree ,
OG_05_0000277 (LandPlants) Phylogenetic Tree(s): OG_05_0000277_tree ,
OG_06_0000320 (SeedPlants) Phylogenetic Tree(s): OG_06_0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00148030
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT3G05910 No alias Pectinacetylesterase family protein 0.03 Archaeplastida
GSVIVT01028231001 No alias Cell wall.pectin.modification and degradation.pectin... 0.04 Archaeplastida
Gb_04448 No alias pectin acetylesterase 0.02 Archaeplastida
Gb_15309 No alias pectin acetylesterase 0.03 Archaeplastida
LOC_Os01g21630.1 No alias pectin acetylesterase 0.02 Archaeplastida
LOC_Os07g44070.1 No alias pectin acetylesterase 0.03 Archaeplastida
MA_3303g0010 No alias pectin acetylesterase 0.02 Archaeplastida
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 69 420
No external refs found!