GSVIVT01034603001


Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease


Gene families : OG0000966 (Archaeplastida) Phylogenetic Tree(s): OG0000966_tree ,
OG_05_0001134 (LandPlants) Phylogenetic Tree(s): OG_05_0001134_tree ,
OG_06_0001034 (SeedPlants) Phylogenetic Tree(s): OG_06_0001034_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034603001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00140970 evm_27.TU.AmTr_v1... Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.09 Archaeplastida
AT3G11910 UBP13 ubiquitin-specific protease 13 0.07 Archaeplastida
AT5G06600 UBP12 ubiquitin-specific protease 12 0.14 Archaeplastida
Cpa|evm.model.tig00000217.46 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00001366.11 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00021350.29 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00021350.30 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
Cre07.g336200 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_02820 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
Gb_34568 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
LOC_Os01g56490.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.04 Archaeplastida
LOC_Os07g06950.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.02 Archaeplastida
LOC_Os11g36470.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.04 Archaeplastida
LOC_Os12g30540.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.08 Archaeplastida
MA_10426331g0010 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.06 Archaeplastida
MA_10427483g0010 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.06 Archaeplastida
MA_10427483g0020 No alias deubiquitinase (UBP12-13) 0.05 Archaeplastida
MA_10428769g0010 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
MA_75085g0010 No alias deubiquitinase (UBP12-13) 0.03 Archaeplastida
Mp3g15430.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.09 Archaeplastida
Pp3c11_18780V3.1 No alias ubiquitin-specific protease 12 0.05 Archaeplastida
Pp3c15_15710V3.1 No alias ubiquitin-specific protease 12 0.05 Archaeplastida
Pp3c7_7420V3.1 No alias ubiquitin-specific protease 12 0.06 Archaeplastida
Smo444302 No alias Protein degradation.peptidase families.cysteine-type... 0.06 Archaeplastida
Solyc05g055090.4.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.13 Archaeplastida
Solyc10g081610.2.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.15 Archaeplastida
Solyc11g006320.2.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.06 Archaeplastida
Solyc11g071700.2.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.1 Archaeplastida
Zm00001e017788_P001 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.21 Archaeplastida
Zm00001e019687_P003 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.04 Archaeplastida
Zm00001e024432_P001 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.02 Archaeplastida
Zm00001e032871_P004 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.08 Archaeplastida
Zm00001e039540_P003 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR024729 USP7_ICP0-binding_dom 621 873
IPR001394 Peptidase_C19_UCH 196 517
IPR029346 USP_C 883 1093
IPR002083 MATH/TRAF_dom 58 177
No external refs found!