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  5. GSVIVT01034942001

GSVIVT01034942001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase


Gene families : OG0002131 (Archaeplastida) Phylogenetic Tree(s): OG0002131_tree ,
OG_05_0004046 (LandPlants) Phylogenetic Tree(s): OG_05_0004046_tree ,
OG_06_0006984 (SeedPlants) Phylogenetic Tree(s): OG_06_0006984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034942001
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00255750 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00003p00213880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT3G17205 UPL6 ubiquitin protein ligase 6 0.14 Archaeplastida
AT3G53090 UPL7 ubiquitin-protein ligase 7 0.08 Archaeplastida
Cre03.g159200 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Cre06.g280300 No alias E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_04194 No alias monomeric E3 ubiquitin ligase (HECT) 0.05 Archaeplastida
Gb_22218 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
LOC_Os05g06690.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.11 Archaeplastida
MA_10429034g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_158585g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g18370.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Mp7g02100.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.05 Archaeplastida
Pp3c17_16520V3.1 No alias ubiquitin protein ligase 6 0.06 Archaeplastida
Smo443962 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Solyc01g057900.3.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.1 Archaeplastida
Zm00001e012275_P001 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Zm00001e031128_P003 No alias monomeric E3 ubiquitin ligase (HECT) 0.06 Archaeplastida
Zm00001e039899_P001 No alias monomeric E3 ubiquitin ligase (HECT) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR000569 HECT_dom 729 1034
No external refs found!