AMTR_s00045p00165950 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.191

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000087 (LandPlants) Phylogenetic Tree(s): OG_05_0000087_tree ,
OG_06_0000067 (SeedPlants) Phylogenetic Tree(s): OG_06_0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00045p00165950
Cluster	HCCA: Cluster_270

Target	Alias	Description	ECC score	Gene Family Method
AT1G18860	WRKY61, ATWRKY61	WRKY DNA-binding protein 61	0.03	Archaeplastida
AT1G29280	ATWRKY65, WRKY65	WRKY DNA-binding protein 65	0.04	Archaeplastida
AT1G62300	WRKY6, ATWRKY6	WRKY family transcription factor	0.02	Archaeplastida
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.02	Archaeplastida
AT2G04880	WRKY1, ZAP1, ATWRKY1	zinc-dependent activator protein-1	0.03	Archaeplastida
AT2G23320	WRKY15	WRKY DNA-binding protein 15	0.02	Archaeplastida
AT2G30250	ATWRKY25, WRKY25	WRKY DNA-binding protein 25	0.02	Archaeplastida
AT2G40740	WRKY55, ATWRKY55	WRKY DNA-binding protein 55	0.04	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.04	Archaeplastida
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.03	Archaeplastida
AT3G04670	WRKY39, ATWRKY39	WRKY DNA-binding protein 39	0.04	Archaeplastida
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.03	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.04	Archaeplastida
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.02	Archaeplastida
AT4G26440	MSP3, ATWRKY34, WRKY34	WRKY DNA-binding protein 34	0.02	Archaeplastida
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.03	Archaeplastida
AT5G15130	WRKY72, ATWRKY72	WRKY DNA-binding protein 72	0.03	Archaeplastida
GSVIVT01001286001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01019419001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01020060001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01027069001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01035884001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_01873	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_07810	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_40261	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os01g09080.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g18584.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g47560.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g54600.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os02g08440.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os03g33012.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os03g45450.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os03g53050.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os04g21950.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os04g51560.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g04640.1	No alias	transcription factor (WRKY)	0.07	Archaeplastida
LOC_Os05g49100.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os06g06360.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os06g44010.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os08g29660.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os12g02420.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_103616g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10426648g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_109104g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_11351g0010	No alias	transcription factor (WRKY). serine carboxypeptidase	0.02	Archaeplastida
MA_124797g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_20468g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_6790522g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_74833g0010	No alias	transcription factor (WRKY)	0.06	Archaeplastida
MA_892467g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_91468g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Mp8g10640.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c13_10830V3.1	No alias	WRKY family transcription factor	0.03	Archaeplastida
Pp3c14_17020V3.1	No alias	WRKY DNA-binding protein 7	0.02	Archaeplastida
Pp3c8_4400V3.1	No alias	WRKY DNA-binding protein 2	0.02	Archaeplastida
Solyc02g080890.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc03g007380.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc07g051840.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g081630.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc12g006170.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e005219_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e011098_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e013838_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015980_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e016622_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020279_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e021431_P001	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e023305_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e025937_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027140_P002	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.04	Archaeplastida
Zm00001e027804_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e029049_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e032189_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e033862_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e034148_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e035859_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e039306_P003	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e040369_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0008430	selenium binding	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	121	179

External Links

No external refs found!

AMTR_s00045p00165950 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation