GSVIVT01035143001


Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.PRL1/MAC2 component


Gene families : OG0005872 (Archaeplastida) Phylogenetic Tree(s): OG0005872_tree ,
OG_05_0006922 (LandPlants) Phylogenetic Tree(s): OG_05_0006922_tree ,
OG_06_0010028 (SeedPlants) Phylogenetic Tree(s): OG_06_0010028_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035143001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g21990.1 No alias component PRL1/MAC2 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Pp3c5_15520V3.1 No alias pleiotropic regulatory locus 1 0.05 Archaeplastida
Solyc01g094480.4.1 No alias component PRL1/MAC2 of non-snRNP MOS4-associated complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004004 ATP-dependent RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 165 202
IPR001680 WD40_repeat 249 286
IPR001680 WD40_repeat 293 328
IPR001680 WD40_repeat 208 244
No external refs found!