GSVIVT01035521001

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component

Gene families : OG0001266 (Archaeplastida) Phylogenetic Tree(s): OG0001266_tree ,
OG_05_0000955 (LandPlants) Phylogenetic Tree(s): OG_05_0000955_tree ,
OG_06_0004777 (SeedPlants) Phylogenetic Tree(s): OG_06_0004777_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035521001
Cluster	HCCA: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method
AT2G24530	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.03	Archaeplastida
LOC_Os04g56300.1	No alias	component ADA1 of SAGA transcription co-activator complex	0.03	Archaeplastida
Zm00001e006681_P001	No alias	component ADA1 of SAGA transcription co-activator complex	0.06	Archaeplastida
Zm00001e041823_P001	No alias	component ADA1 of SAGA transcription co-activator complex	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044451	nucleoplasm part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0070461	SAGA-type complex	IEA	Interproscan
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005667	transcription factor complex	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR024738	Hfi1/Tada1	4	242

External Links

No external refs found!