GSVIVT01035852001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0003909 (SeedPlants) Phylogenetic Tree(s): OG_06_0003909_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035852001
Cluster	HCCA: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00007p00268280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00040p00195730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00049p00214620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00097p00165740	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00099p00039760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G01250	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G12890	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G21910	DREB26	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.03	Archaeplastida
AT1G71450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G78080	RAP2.4	related to AP2 4	0.03	Archaeplastida
AT1G80580	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G16280	No alias	Integrase-type DNA-binding superfamily protein	0.09	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT4G17490	ERF-6-6, ERF6, ATERF6	ethylene responsive element binding factor 6	0.04	Archaeplastida
AT4G25480	DREB1A, ATCBF3, CBF3	dehydration response element B1A	0.04	Archaeplastida
AT4G32800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.04	Archaeplastida
AT5G11190	SHN3	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT5G47220	ERF2, ATERF2, ATERF-2	ethylene responsive element binding factor 2	0.03	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.03	Archaeplastida
AT5G51990	CBF4, DREB1D	C-repeat-binding factor 4	0.05	Archaeplastida
AT5G52020	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G61600	ERF104	ethylene response factor 104	0.05	Archaeplastida
AT5G64750	ABR1	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
GSVIVT01009007001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01009801001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01028050001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033416001	No alias	External stimuli response.biotic...	0.08	Archaeplastida
GSVIVT01035098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
Gb_00125	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_07475	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_08541	No alias	transcription factor (DREB)	0.07	Archaeplastida
Gb_11793	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_11794	No alias	transcription factor (DREB)	0.06	Archaeplastida
Gb_17501	No alias	transcription factor (ERF)	0.07	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_26667	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_29220	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_29359	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Gb_36992	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_37188	No alias	transcription factor (DREB)	0.09	Archaeplastida
Gb_41433	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g73770.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
LOC_Os02g06330.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os02g54050.1	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Archaeplastida
LOC_Os02g55380.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os03g08500.2	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g48350.1	No alias	Dehydration-responsive element-binding protein 1E...	0.03	Archaeplastida
LOC_Os04g57340.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os05g25260.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g23050.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os08g41030.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os09g28440.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
LOC_Os10g38000.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os12g39330.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
MA_10242823g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10430231g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_10431706g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10433310g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10434101g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_17001g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_203191g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_2040g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_426919g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_7850076g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_9565555g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp5g02590.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c11_10660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c11_24520V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c1_27630V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c1_5010V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c23_21450V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_4250V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c26_14710V3.1	No alias	ethylene responsive element binding factor 1	0.01	Archaeplastida
Pp3c2_36690V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_2530V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c5_880V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.08	Archaeplastida
Pp3c6_19350V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c6_20480V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
Pp3c6_28290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c9_2020V3.1	No alias	erf domain protein 9	0.04	Archaeplastida
Smo92334	No alias	Cell wall.cutin and suberin.biosynthesis...	0.05	Archaeplastida
Solyc01g057080.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc01g067540.2.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc01g090300.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g090800.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g005510.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g026280.3.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.02	Archaeplastida
Solyc03g093550.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g114440.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Solyc03g116610.3.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Solyc03g117230.1.1	No alias	Ethylene-responsive transcription factor ERF084...	0.06	Archaeplastida
Solyc04g051360.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g072900.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc05g050830.3.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc06g066540.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc11g012980.1.1	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc12g008350.3.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e001139_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.05	Archaeplastida
Zm00001e003800_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e007205_P001	No alias	Dehydration-responsive element-binding protein 1E...	0.03	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e014008_P002	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
Zm00001e014413_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e015312_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e015326_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e015327_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e015328_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e015430_P001	No alias	Dehydration-responsive element-binding protein 1G...	0.03	Archaeplastida
Zm00001e015968_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e022016_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e024669_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e026573_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e031438_P002	No alias	Ethylene-responsive transcription factor RAP2-3...	0.04	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e034242_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e034741_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Zm00001e036201_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.02	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
Zm00001e038888_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041620_P002	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	7	56

External Links

No external refs found!

GSVIVT01035852001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation