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No description available
Gene families : OG0006112 (Archaeplastida) Phylogenetic Tree(s): OG0006112_tree ,
OG_05_0008042 (LandPlants) Phylogenetic Tree(s): OG_05_0008042_tree ,
OG_06_0008839 (SeedPlants) Phylogenetic Tree(s): OG_06_0008839_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01036491001 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G38720 | No alias | unknown protein; Has 13419 Blast hits to 9093 proteins... | 0.03 | Archaeplastida | |
| Cre01.g052200 | No alias | No description available | 0.03 | Archaeplastida | |
| LOC_Os02g49620.1 | No alias | pre-40S ribosomal subunit assembly factor (RRP7) | 0.04 | Archaeplastida | |
| Pp3c10_24110V3.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc03g046350.3.1 | No alias | pre-40S ribosomal subunit assembly factor (RRP7) | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| CC | GO:0005758 | mitochondrial intermembrane space | IEP | Neighborhood |
| CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
| CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| BP | GO:0006825 | copper ion transport | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| MF | GO:0008199 | ferric iron binding | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
| MF | GO:0016530 | metallochaperone activity | IEP | Neighborhood |
| MF | GO:0016531 | copper chaperone activity | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
| CC | GO:0031970 | organelle envelope lumen | IEP | Neighborhood |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| MF | GO:0032977 | membrane insertase activity | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| MF | GO:0140104 | molecular carrier activity | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024326 | RRP7 | 190 | 313 |
| No external refs found! |