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  5. GSVIVT01037844001

GSVIVT01037844001


Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase


Gene families : OG0000435 (Archaeplastida) Phylogenetic Tree(s): OG0000435_tree ,
OG_05_0000257 (LandPlants) Phylogenetic Tree(s): OG_05_0000257_tree ,
OG_06_0001017 (SeedPlants) Phylogenetic Tree(s): OG_06_0001017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037844001
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246460 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
AT5G09730 BXL3, BX3, XYL3,... beta-xylosidase 3 0.03 Archaeplastida
AT5G49360 ATBXL1, BXL1 beta-xylosidase 1 0.03 Archaeplastida
GSVIVT01017656001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 Archaeplastida
Gb_32463 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
Gb_39728 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
LOC_Os11g19160.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Archaeplastida
LOC_Os11g19210.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
MA_249055g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
MA_99945g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Archaeplastida
Zm00001e007432_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
Zm00001e008876_P002 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Zm00001e037605_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 133 375
IPR002772 Glyco_hydro_3_C 423 653
IPR026891 Fn3-like 679 750
No external refs found!