Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01038546001 | |
Cluster | HCCA: Cluster_169 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00101250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00010p00161740 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00021p00242180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00038p00046180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00071p00109420 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00105p00078750 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00129p00033080 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00129p00070300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.04 | Archaeplastida | |
AT1G53840 | PME1, ATPME1 | pectin methylesterase 1 | 0.03 | Archaeplastida | |
AT2G26440 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT2G45220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT2G47550 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G10720 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G43270 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G47400 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT4G02320 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G04970 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G27870 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT5G53370 | ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | 0.03 | Archaeplastida | |
GSVIVT01016667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01018622001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01027652001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01028040001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01031667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01037348001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
Gb_05254 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_06354 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_10523 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Gb_21388 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Gb_24214 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_24564 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Gb_25439 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_28387 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_35881 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_36012 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os01g20980.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g21034.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os01g65790.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os02g54190.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os06g09340.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os07g47830.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os07g49100.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os08g34900.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os11g36240.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_10377619g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_130858g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_51464g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_648837g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_96515g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp6g15150.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp8g00060.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp8g09330.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Pp3c10_25030V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c15_12280V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c18_22120V3.1 | No alias | pectin methylesterase PCR fragment F | 0.03 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c21_22110V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Smo266995 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Solyc01g091050.4.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Solyc01g098940.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc01g099950.1.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc02g080220.3.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc02g081990.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g078100.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083360.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083840.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc03g123620.4.1 | No alias | pectin methylesterase | 0.08 | Archaeplastida | |
Solyc05g047590.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc06g009180.3.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc06g034360.2.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc07g017600.3.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Solyc07g064190.3.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Zm00001e006791_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e017514_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e019069_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e025576_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Zm00001e026790_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
CC | GO:0005576 | extracellular region | IEP | Neighborhood |
CC | GO:0005618 | cell wall | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
MF | GO:0015267 | channel activity | IEP | Neighborhood |
BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
CC | GO:0048046 | apoplast | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000070 | Pectinesterase_cat | 37 | 334 |
No external refs found! |