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  5. GSVIVT01038690001

GSVIVT01038690001


Description : Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC5/TMF-type golgin


Gene families : OG0003240 (Archaeplastida) Phylogenetic Tree(s): OG0003240_tree ,
OG_05_0004501 (LandPlants) Phylogenetic Tree(s): OG_05_0004501_tree ,
OG_06_0004575 (SeedPlants) Phylogenetic Tree(s): OG_06_0004575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038690001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00089980 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.Golgi... 0.03 Archaeplastida
AT1G79830 GC5 golgin candidate 5 0.03 Archaeplastida
Cre03.g187000 No alias Golgin candidate 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os05g48620.1 No alias golgin (GC5/TMF) 0.03 Archaeplastida
MA_9882g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp8g06100.1 No alias golgin (GC5/TMF) 0.06 Archaeplastida
Pp3c12_5050V3.1 No alias golgin candidate 5 0.02 Archaeplastida
Solyc06g066610.4.1 No alias golgin (GC5/TMF) 0.05 Archaeplastida
Zm00001e026507_P001 No alias golgin (GC5/TMF) 0.05 Archaeplastida
Zm00001e026510_P001 No alias Golgin candidate 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e032402_P001 No alias golgin (GC5/TMF) 0.17 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR022091 TMF_TATA-bd 805 917
IPR022092 TMF_DNA-bd 399 470
No external refs found!