Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component
Gene families : OG0003272 (Archaeplastida) Phylogenetic Tree(s): OG0003272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre01.g029650 | |
Cluster | HCCA: Cluster_163 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G17790 | ZIP3, VPS35A | VPS35 homolog A | 0.02 | Archaeplastida | |
Mp3g20440.1 | No alias | component VPS35 of Retromer protein recycling complex | 0.03 | Archaeplastida | |
Solyc02g083560.3.1 | No alias | component VPS35 of Retromer protein recycling complex | 0.04 | Archaeplastida | |
Zm00001e011849_P003 | No alias | component VPS35 of Retromer protein recycling complex | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015031 | protein transport | IEA | Interproscan |
CC | GO:0030906 | retromer, cargo-selective complex | IEA | Interproscan |
BP | GO:0042147 | retrograde transport, endosome to Golgi | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
CC | GO:0017119 | Golgi transport complex | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
CC | GO:0030117 | membrane coat | IEP | Neighborhood |
CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
CC | GO:0030127 | COPII vesicle coat | IEP | Neighborhood |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Neighborhood |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
CC | GO:0099023 | tethering complex | IEP | Neighborhood |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005378 | Vps35 | 15 | 880 |
No external refs found! |