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  5. Cre01.g032300

Cre01.g032300


No description available


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g032300
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00202090 evm_27.TU.AmTr_v1... RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00030p00198740 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00061p00142700 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.01 Archaeplastida
AT3G52380 PDE322, CP33 chloroplast RNA-binding protein 33 0.02 Archaeplastida
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.02 Archaeplastida
AT4G24770 ATRBP31, CP31,... 31-kDa RNA binding protein 0.01 Archaeplastida
GSVIVT01007596001 No alias RNA processing.organelle machineries.RNA... 0.01 Archaeplastida
GSVIVT01025697001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.02 Archaeplastida
GSVIVT01032361001 No alias RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
Gb_37118 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
Gb_39591 No alias Organelle RRM domain-containing protein 6, chloroplastic... 0.02 Archaeplastida
LOC_Os01g74340.1 No alias Glycine-rich RNA-binding protein 2, mitochondrial... 0.05 Archaeplastida
LOC_Os02g57010.1 No alias 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.04 Archaeplastida
LOC_Os03g25960.1 No alias RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os09g39180.1 No alias RNA editing factor (CP31) 0.01 Archaeplastida
MA_10435787g0010 No alias Small RNA-binding protein 11, chloroplastic... 0.04 Archaeplastida
Mp2g13800.1 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 Archaeplastida
Mp4g15980.1 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
Mp8g03420.1 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.01 Archaeplastida
Solyc01g006940.4.1 No alias 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.01 Archaeplastida
Solyc03g111840.3.1 No alias RNA editing factor (CP31) 0.02 Archaeplastida
Solyc09g090960.4.1 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.01 Archaeplastida
Solyc10g086150.2.1 No alias 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Zm00001e001824_P002 No alias RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e003947_P001 No alias RNA editing factor (CP31) 0.03 Archaeplastida
Zm00001e008185_P001 No alias Small RNA-binding protein 11, chloroplastic... 0.04 Archaeplastida
Zm00001e016211_P001 No alias 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.01 Archaeplastida
Zm00001e018330_P004 No alias RNA editing factor (ORRM) 0.06 Archaeplastida
Zm00001e022086_P002 No alias RNA editing factor (CP31) 0.02 Archaeplastida
Zm00001e028481_P002 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.02 Archaeplastida
Zm00001e032835_P001 No alias RNA-binding protein CP33, chloroplastic OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e033465_P001 No alias RNA editing factor (CP31) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 14 81
IPR000504 RRM_dom 145 213
No external refs found!