Coexpression cluster: Cluster_1 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009141 nucleoside triphosphate metabolic process 5.75% (5/87) 5.04 0.0 0.000111
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors 4.6% (4/87) 5.15 4e-06 0.000638
GO:0017144 drug metabolic process 5.75% (5/87) 4.16 9e-06 0.000828
GO:0016491 oxidoreductase activity 11.49% (10/87) 2.26 4.4e-05 0.003164
GO:0009161 ribonucleoside monophosphate metabolic process 3.45% (3/87) 4.26 0.00051 0.003402
GO:0009167 purine ribonucleoside monophosphate metabolic process 3.45% (3/87) 4.26 0.00051 0.003402
GO:0009126 purine nucleoside monophosphate metabolic process 3.45% (3/87) 4.26 0.00051 0.003402
GO:0009123 nucleoside monophosphate metabolic process 3.45% (3/87) 4.26 0.00051 0.003402
GO:0009231 riboflavin biosynthetic process 2.3% (2/87) 5.86 0.000491 0.003616
GO:0042727 flavin-containing compound biosynthetic process 2.3% (2/87) 5.86 0.000491 0.003616
GO:0042726 flavin-containing compound metabolic process 2.3% (2/87) 5.86 0.000491 0.003616
GO:0006771 riboflavin metabolic process 2.3% (2/87) 5.86 0.000491 0.003616
GO:0044283 small molecule biosynthetic process 5.75% (5/87) 3.52 7.6e-05 0.003627
GO:0009124 nucleoside monophosphate biosynthetic process 3.45% (3/87) 4.3 0.000464 0.003802
GO:1901361 organic cyclic compound catabolic process 3.45% (3/87) 4.3 0.000464 0.003802
GO:0009156 ribonucleoside monophosphate biosynthetic process 3.45% (3/87) 4.3 0.000464 0.003802
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 3.45% (3/87) 4.3 0.000464 0.003802
GO:0019439 aromatic compound catabolic process 3.45% (3/87) 4.3 0.000464 0.003802
GO:0009127 purine nucleoside monophosphate biosynthetic process 3.45% (3/87) 4.3 0.000464 0.003802
GO:0044271 cellular nitrogen compound biosynthetic process 9.2% (8/87) 2.09 0.00059 0.003849
GO:0009143 nucleoside triphosphate catabolic process 2.3% (2/87) 7.09 7.1e-05 0.004081
GO:0009144 purine nucleoside triphosphate metabolic process 3.45% (3/87) 4.45 0.000341 0.004084
GO:0009205 purine ribonucleoside triphosphate metabolic process 3.45% (3/87) 4.45 0.000341 0.004084
GO:0009199 ribonucleoside triphosphate metabolic process 3.45% (3/87) 4.45 0.000341 0.004084
GO:0046700 heterocycle catabolic process 3.45% (3/87) 4.35 0.00042 0.004159
GO:0034655 nucleobase-containing compound catabolic process 3.45% (3/87) 4.35 0.00042 0.004159
GO:0044270 cellular nitrogen compound catabolic process 3.45% (3/87) 4.35 0.00042 0.004159
GO:0009055 electron transfer activity 3.45% (3/87) 4.35 0.00042 0.004159
GO:0045454 cell redox homeostasis 4.6% (4/87) 4.03 0.000105 0.004288
GO:0009142 nucleoside triphosphate biosynthetic process 3.45% (3/87) 4.56 0.000273 0.004352
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.45% (3/87) 4.56 0.000273 0.004352
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.45% (3/87) 4.56 0.000273 0.004352
GO:0006754 ATP biosynthetic process 3.45% (3/87) 4.56 0.000273 0.004352
GO:0046434 organophosphate catabolic process 3.45% (3/87) 4.56 0.000273 0.004352
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.45% (3/87) 4.56 0.000273 0.004352
GO:0019725 cellular homeostasis 4.6% (4/87) 3.97 0.000122 0.004378
GO:0009260 ribonucleotide biosynthetic process 3.45% (3/87) 4.09 0.000724 0.004418
GO:0046390 ribose phosphate biosynthetic process 3.45% (3/87) 4.09 0.000724 0.004418
GO:0009152 purine ribonucleotide biosynthetic process 3.45% (3/87) 4.09 0.000724 0.004418
GO:0065008 regulation of biological quality 4.6% (4/87) 3.61 0.000327 0.004465
GO:0018130 heterocycle biosynthetic process 8.05% (7/87) 2.43 0.000316 0.004541
GO:0046034 ATP metabolic process 3.45% (3/87) 4.5 0.000306 0.004622
GO:1901362 organic cyclic compound biosynthetic process 8.05% (7/87) 2.38 0.000405 0.004645
GO:0006164 purine nucleotide biosynthetic process 3.45% (3/87) 4.01 0.000849 0.004872
GO:0015986 ATP synthesis coupled proton transport 2.3% (2/87) 5.5 0.000837 0.004902
GO:0015985 energy coupled proton transport, down electrochemical gradient 2.3% (2/87) 5.5 0.000837 0.004902
GO:0055114 oxidation-reduction process 9.2% (8/87) 1.99 0.000932 0.005145
GO:0044281 small molecule metabolic process 8.05% (7/87) 2.18 0.00092 0.005178
GO:0009259 ribonucleotide metabolic process 3.45% (3/87) 3.93 0.000987 0.005246
GO:0009150 purine ribonucleotide metabolic process 3.45% (3/87) 3.93 0.000987 0.005246
GO:0015035 protein disulfide oxidoreductase activity 2.3% (2/87) 5.35 0.001043 0.005251
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor 2.3% (2/87) 5.35 0.001043 0.005251
GO:0015036 disulfide oxidoreductase activity 2.3% (2/87) 5.35 0.001043 0.005251
GO:0072522 purine-containing compound biosynthetic process 3.45% (3/87) 3.9 0.001061 0.005251
GO:0006163 purine nucleotide metabolic process 3.45% (3/87) 3.86 0.001139 0.00554
GO:0042592 homeostatic process 4.6% (4/87) 3.79 0.0002 0.005737
GO:0019693 ribose phosphate metabolic process 3.45% (3/87) 3.83 0.00122 0.00574
GO:0034404 nucleobase-containing small molecule biosynthetic process 3.45% (3/87) 4.61 0.000242 0.005795
GO:1901566 organonitrogen compound biosynthetic process 6.9% (6/87) 2.34 0.001217 0.005822
GO:1901292 nucleoside phosphate catabolic process 3.45% (3/87) 4.73 0.000188 0.005992
GO:0047429 nucleoside-triphosphate diphosphatase activity 2.3% (2/87) 6.35 0.000235 0.006143
GO:0072521 purine-containing compound metabolic process 3.45% (3/87) 3.76 0.001393 0.006448
GO:0006753 nucleoside phosphate metabolic process 5.75% (5/87) 2.6 0.001418 0.00646
GO:1901137 carbohydrate derivative biosynthetic process 3.45% (3/87) 3.64 0.001783 0.007996
GO:0055086 nucleobase-containing small molecule metabolic process 5.75% (5/87) 2.49 0.002015 0.008898
GO:0042364 water-soluble vitamin biosynthetic process 2.3% (2/87) 4.67 0.002728 0.011514
GO:0009110 vitamin biosynthetic process 2.3% (2/87) 4.67 0.002728 0.011514
GO:0044249 cellular biosynthetic process 9.2% (8/87) 1.74 0.002703 0.011756
GO:0044248 cellular catabolic process 3.45% (3/87) 3.4 0.002893 0.012034
GO:0006767 water-soluble vitamin metabolic process 2.3% (2/87) 4.58 0.003082 0.012458
GO:0006766 vitamin metabolic process 2.3% (2/87) 4.58 0.003082 0.012458
GO:1901576 organic substance biosynthetic process 9.2% (8/87) 1.69 0.003412 0.013233
GO:0019637 organophosphate metabolic process 5.75% (5/87) 2.31 0.003368 0.013243
GO:1901575 organic substance catabolic process 3.45% (3/87) 3.33 0.003339 0.01331
GO:0009056 catabolic process 3.45% (3/87) 3.26 0.003825 0.014637
GO:0003824 catalytic activity 26.44% (23/87) 0.81 0.004021 0.015186
GO:0034654 nucleobase-containing compound biosynthetic process 5.75% (5/87) 2.23 0.004289 0.015985
GO:0008150 biological_process 29.89% (26/87) 0.74 0.004427 0.016291
GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity 1.15% (1/87) 7.67 0.004904 0.017375
GO:0009349 riboflavin synthase complex 1.15% (1/87) 7.67 0.004904 0.017375
GO:0003919 FMN adenylyltransferase activity 1.15% (1/87) 7.67 0.004904 0.017375
GO:1902600 proton transmembrane transport 2.3% (2/87) 4.15 0.005625 0.019451
GO:0009058 biosynthetic process 9.2% (8/87) 1.57 0.005607 0.019624
GO:1901135 carbohydrate derivative metabolic process 3.45% (3/87) 3.05 0.005746 0.019632
GO:0034622 cellular protein-containing complex assembly 2.3% (2/87) 3.92 0.007706 0.026018
GO:0015078 proton transmembrane transporter activity 2.3% (2/87) 3.86 0.008272 0.027606
GO:0019438 aromatic compound biosynthetic process 5.75% (5/87) 1.99 0.008649 0.028532
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 1.15% (1/87) 6.67 0.009784 0.030857
GO:0009512 cytochrome b6f complex 1.15% (1/87) 6.67 0.009784 0.030857
GO:0017004 cytochrome complex assembly 1.15% (1/87) 6.67 0.009784 0.030857
GO:0008152 metabolic process 22.99% (20/87) 0.78 0.009562 0.031184
GO:0098796 membrane protein complex 3.45% (3/87) 2.75 0.010146 0.031311
GO:0044436 thylakoid part 2.3% (2/87) 3.72 0.01008 0.031444
GO:0015077 monovalent inorganic cation transmembrane transporter activity 2.3% (2/87) 3.63 0.011373 0.034359
GO:0065003 protein-containing complex assembly 2.3% (2/87) 3.63 0.011373 0.034359
GO:0009987 cellular process 19.54% (17/87) 0.84 0.012131 0.035168
GO:0098655 cation transmembrane transport 2.3% (2/87) 3.58 0.012046 0.035277
GO:0098662 inorganic cation transmembrane transport 2.3% (2/87) 3.58 0.012046 0.035277
GO:0098660 inorganic ion transmembrane transport 2.3% (2/87) 3.58 0.012046 0.035277
GO:0003674 molecular_function 39.08% (34/87) 0.5 0.013268 0.038078
GO:0008168 methyltransferase activity 3.45% (3/87) 2.54 0.01491 0.039992
GO:0015672 monovalent inorganic cation transport 2.3% (2/87) 3.46 0.014165 0.040252
GO:0043933 protein-containing complex subunit organization 2.3% (2/87) 3.42 0.014905 0.040356
GO:0034220 ion transmembrane transport 2.3% (2/87) 3.42 0.014905 0.040356
GO:0016872 intramolecular lyase activity 1.15% (1/87) 6.09 0.014641 0.040402
GO:0004683 calmodulin-dependent protein kinase activity 1.15% (1/87) 6.09 0.014641 0.040402
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 1.15% (1/87) 6.09 0.014641 0.040402
GO:0005737 cytoplasm 2.3% (2/87) 3.35 0.016434 0.043671
GO:0016741 transferase activity, transferring one-carbon groups 3.45% (3/87) 2.44 0.018111 0.047686
GO:0034641 cellular nitrogen compound metabolic process 9.2% (8/87) 1.25 0.019526 0.048729
GO:0070566 adenylyltransferase activity 1.15% (1/87) 5.67 0.019473 0.049025
GO:0070069 cytochrome complex 1.15% (1/87) 5.67 0.019473 0.049025
GO:0004332 fructose-bisphosphate aldolase activity 1.15% (1/87) 5.67 0.019473 0.049025
GO:0033743 peptide-methionine (R)-S-oxide reductase activity 1.15% (1/87) 5.67 0.019473 0.049025
GO:0004427 inorganic diphosphatase activity 1.15% (1/87) 5.67 0.019473 0.049025
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_34 0.038 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.05 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_151 0.044 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_119 0.043 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_124 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_238 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_3 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_12 0.032 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_75 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_98 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_182 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.037 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.037 Archaeplastida Compare
Gingko biloba HCCA Cluster_232 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.052 Archaeplastida Compare
Zea mays HCCA Cluster_133 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_146 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_187 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.042 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.07 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.057 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.039 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_90 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_189 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.091 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.051 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_136 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.059 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_324 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.05 Archaeplastida Compare
Oryza sativa HCCA Cluster_342 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_129 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.034 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_186 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.076 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_73 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.041 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.05 Archaeplastida Compare
Vitis vinifera HCCA Cluster_124 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.045 Archaeplastida Compare
Vitis vinifera HCCA Cluster_176 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.037 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_89 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_116 0.02 Archaeplastida Compare
Sequences (87) (download table)

InterPro Domains

GO Terms

Family Terms