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Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase
Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre01.g051700 | |
| Cluster | HCCA: Cluster_134 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00161170 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
| AT1G24580 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| AT1G49200 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| AT1G49210 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| AT1G67856 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| AT2G42360 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| AT3G05200 | ATL6 | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| AT4G38140 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| AT5G66070 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| GSVIVT01012018001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
| GSVIVT01020665001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
| GSVIVT01023776001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
| GSVIVT01027524001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
| Gb_14775 | No alias | RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... | 0.01 | Archaeplastida | |
| Gb_23076 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| Gb_39486 | No alias | RING-H2 finger protein ATL16 OS=Arabidopsis thaliana... | 0.01 | Archaeplastida | |
| LOC_Os02g15060.1 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| LOC_Os02g36330.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| LOC_Os02g37450.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| LOC_Os02g45780.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| LOC_Os03g22110.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| LOC_Os04g37740.1 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| LOC_Os09g36500.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| LOC_Os12g02220.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| MA_10435495g0010 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| MA_5319g0010 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| MA_6931619g0010 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| Pp3c17_13190V3.1 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| Pp3c23_1651V3.1 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| Pp3c5_4170V3.1 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
| Smo412606 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
| Smo96681 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
| Solyc02g038805.1.1 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| Solyc09g075320.1.1 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| Solyc11g066510.3.1 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| Solyc12g055710.1.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| Zm00001e003126_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e013412_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e013809_P001 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| Zm00001e014764_P001 | No alias | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.01 | Archaeplastida | |
| Zm00001e015259_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e015905_P001 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| Zm00001e016474_P001 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| Zm00001e017509_P001 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| Zm00001e021729_P001 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| Zm00001e029032_P001 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
| Zm00001e032186_P001 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Neighborhood |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015923 | mannosidase activity | IEP | Neighborhood |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0017025 | TBP-class protein binding | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032200 | telomere organization | IEP | Neighborhood |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 855 | 897 |
| No external refs found! |