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  5. Cre02.g085050

Cre02.g085050


Description : E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana


Gene families : OG0000790 (Archaeplastida) Phylogenetic Tree(s): OG0000790_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g085050
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00097p00139510 evm_27.TU.AmTr_v1... External stimuli response.light.red/far red... 0.03 Archaeplastida
AT1G53090 SPA4 SPA1-related 4 0.02 Archaeplastida
AT2G32950 FUS1, EMB168,... Transducin/WD40 repeat-like superfamily protein 0.01 Archaeplastida
AT2G46340 SPA1 SPA (suppressor of phyA-105) protein family 0.03 Archaeplastida
AT3G15354 SPA3 SPA1-related 3 0.04 Archaeplastida
GSVIVT01007271001 No alias External stimuli response.light.red/far red... 0.04 Archaeplastida
LOC_Os02g53140.1 No alias protein kinase (PEK). component COP1 of COP1-SPA E3... 0.04 Archaeplastida
MA_423393g0010 No alias protein kinase (PEK). regulator component SPA of... 0.03 Archaeplastida
Mp5g12010.1 No alias protein kinase (PEK). component COP1 of COP1-SPA E3... 0.02 Archaeplastida
Pp3c2_15860V3.1 No alias SPA1-related 3 0.01 Archaeplastida
Pp3c5_26150V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Smo101888 No alias Protein modification.phosphorylation.PEK kinase 0.03 Archaeplastida
Smo141846 No alias External stimuli response.light.red/far red... 0.04 Archaeplastida
Smo171333 No alias External stimuli response.light.red/far red... 0.02 Archaeplastida
Smo98534 No alias External stimuli response.light.red/far red... 0.03 Archaeplastida
Solyc07g063120.4.1 No alias protein kinase (PEK). regulator component SPA of... 0.03 Archaeplastida
Solyc08g081990.3.1 No alias protein kinase (PEK). regulator component SPA of... 0.02 Archaeplastida
Solyc12g013840.3.1 No alias protein kinase (PEK). regulator component SPA of... 0.03 Archaeplastida
Zm00001e015983_P001 No alias protein kinase (PEK). component COP1 of COP1-SPA E3... 0.03 Archaeplastida
Zm00001e019928_P005 No alias protein kinase (PEK). regulator component SPA of... 0.03 Archaeplastida
Zm00001e028209_P002 No alias protein kinase (PEK). regulator component SPA of... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1260 1297
IPR001680 WD40_repeat 1175 1211
No external refs found!