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  5. Cre03.g171650

Cre03.g171650


Description : DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana


Gene families : OG0000373 (Archaeplastida) Phylogenetic Tree(s): OG0000373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g171650
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00237040 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G58060 No alias RNA helicase family protein 0.02 Archaeplastida
AT2G01130 No alias DEA(D/H)-box RNA helicase family protein 0.01 Archaeplastida
AT2G30800 HVT1, ATVT-1 helicase in vascular tissue and tapetum 0.02 Archaeplastida
LOC_Os01g02884.1 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os04g35260.1 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.01 Archaeplastida
MA_10432575g0010 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.01 Archaeplastida
MA_10434659g0010 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.01 Archaeplastida
MA_10437209g0010 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.01 Archaeplastida
MA_22839g0010 No alias DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... 0.03 Archaeplastida
Mp3g02150.1 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.02 Archaeplastida
Mp5g09990.1 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.01 Archaeplastida
Pp3c14_12310V3.1 No alias RNA helicase family protein 0.02 Archaeplastida
Smo50132 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g006970.4.1 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 Archaeplastida
Solyc07g044930.3.1 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e028983_P004 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 638 793
IPR007502 Helicase-assoc_dom 1101 1190
IPR011709 DUF1605 1329 1427
IPR001650 Helicase_C 903 1031
No external refs found!