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  5. AMTR_s00048p00183690

AMTR_s00048p00183690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.137

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0003579 (Archaeplastida) Phylogenetic Tree(s): OG0003579_tree ,
OG_05_0002485 (LandPlants) Phylogenetic Tree(s): OG_05_0002485_tree ,
OG_06_0003866 (SeedPlants) Phylogenetic Tree(s): OG_06_0003866_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00183690
Cluster HCCA: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
AT1G06170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT2G31220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
GSVIVT01011330001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
LOC_Os01g18870.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_1220g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
Pp3c6_8660V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g081090.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc01g081100.3.1 No alias transcription factor (bHLH) 0.11 Archaeplastida
Zm00001e025435_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 277 319
No external refs found!