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  5. Cre06.g259150

Cre06.g259150


Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor


Gene families : OG0001561 (Archaeplastida) Phylogenetic Tree(s): OG0001561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g259150
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT4G20360 ATRAB8D, ATRABE1B, RABE1b RAB GTPase homolog E1B 0.02 Archaeplastida
Cpa|evm.model.tig00021127.40 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
GSVIVT01007638001 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Gb_17545 No alias EF-Tu translation elongation factor 0.02 Archaeplastida
LOC_Os03g63410.1 No alias EF-Tu translation elongation factor 0.02 Archaeplastida
Pp3c1_38600V3.1 No alias RAB GTPase homolog E1B 0.02 Archaeplastida
Pp3c1_38630V3.1 No alias RAB GTPase homolog E1B 0.04 Archaeplastida
Pp3c20_17410V3.1 No alias GTP binding Elongation factor Tu family protein 0.03 Archaeplastida
Solyc06g008940.4.1 No alias EF-Tu translation elongation factor 0.03 Archaeplastida
Solyc09g073000.3.1 No alias EF-Tu translation elongation factor 0.05 Archaeplastida
Zm00001e006373_P001 No alias EF-Tu translation elongation factor 0.04 Archaeplastida
Zm00001e011649_P001 No alias EF-Tu translation elongation factor 0.02 Archaeplastida
Zm00001e015008_P001 No alias EF-Tu translation elongation factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004133 glycogen debranching enzyme activity IEP Neighborhood
MF GO:0004134 4-alpha-glucanotransferase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0005347 ATP transmembrane transporter activity IEP Neighborhood
MF GO:0005471 ATP:ADP antiporter activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0015215 nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015217 ADP transmembrane transporter activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015301 anion:anion antiporter activity IEP Neighborhood
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031419 cobalamin binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 57 251
IPR004160 Transl_elong_EFTu/EF1A_C 349 442
IPR004161 EFTu-like_2 276 344
No external refs found!