Coexpression cluster: Cluster_17 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044444 cytoplasmic part 15.25% (27/177) 3.56 0.0 0.0
GO:0003735 structural constituent of ribosome 11.3% (20/177) 4.06 0.0 0.0
GO:0005198 structural molecule activity 11.3% (20/177) 3.95 0.0 0.0
GO:0006412 translation 10.73% (19/177) 4.01 0.0 0.0
GO:1990904 ribonucleoprotein complex 11.3% (20/177) 3.87 0.0 0.0
GO:0043043 peptide biosynthetic process 10.73% (19/177) 3.96 0.0 0.0
GO:0006518 peptide metabolic process 10.73% (19/177) 3.93 0.0 0.0
GO:0043604 amide biosynthetic process 10.73% (19/177) 3.88 0.0 0.0
GO:0043603 cellular amide metabolic process 10.73% (19/177) 3.84 0.0 0.0
GO:0005840 ribosome 10.17% (18/177) 3.97 0.0 0.0
GO:0043228 non-membrane-bounded organelle 10.17% (18/177) 3.78 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 10.17% (18/177) 3.78 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 11.3% (20/177) 3.44 0.0 0.0
GO:0009059 macromolecule biosynthetic process 11.3% (20/177) 3.3 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 11.86% (21/177) 3.12 0.0 0.0
GO:0043229 intracellular organelle 11.86% (21/177) 3.05 0.0 0.0
GO:0043226 organelle 11.86% (21/177) 3.04 0.0 0.0
GO:0032991 protein-containing complex 14.69% (26/177) 2.51 0.0 0.0
GO:1901576 organic substance biosynthetic process 14.69% (26/177) 2.36 0.0 0.0
GO:0009058 biosynthetic process 15.25% (27/177) 2.3 0.0 0.0
GO:0044424 intracellular part 15.25% (27/177) 2.15 0.0 0.0
GO:0005575 cellular_component 22.03% (39/177) 1.66 0.0 0.0
GO:0044249 cellular biosynthetic process 13.56% (24/177) 2.3 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 11.86% (21/177) 2.45 0.0 0.0
GO:0044464 cell part 15.25% (27/177) 2.06 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 12.43% (22/177) 1.68 1e-06 1.6e-05
GO:0005622 intracellular 3.95% (7/177) 3.03 2.4e-05 0.000261
GO:0033180 proton-transporting V-type ATPase, V1 domain 1.13% (2/177) 6.65 9.9e-05 0.001029
GO:0099132 ATP hydrolysis coupled cation transmembrane transport 1.69% (3/177) 4.77 0.000152 0.0013
GO:0099131 ATP hydrolysis coupled ion transmembrane transport 1.69% (3/177) 4.77 0.000152 0.0013
GO:0015991 ATP hydrolysis coupled proton transport 1.69% (3/177) 4.77 0.000152 0.0013
GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient 1.69% (3/177) 4.77 0.000152 0.0013
GO:0090662 ATP hydrolysis coupled transmembrane transport 1.69% (3/177) 4.77 0.000152 0.0013
GO:0044267 cellular protein metabolic process 11.86% (21/177) 1.29 0.000145 0.001456
GO:0044431 Golgi apparatus part 1.69% (3/177) 4.65 0.000201 0.001625
GO:0019538 protein metabolic process 12.99% (23/177) 1.18 0.0002 0.00166
GO:1901564 organonitrogen compound metabolic process 14.12% (25/177) 1.06 0.000392 0.003081
GO:0044391 ribosomal subunit 1.13% (2/177) 5.65 0.000586 0.004373
GO:0017119 Golgi transport complex 1.13% (2/177) 5.65 0.000586 0.004373
GO:0044260 cellular macromolecule metabolic process 12.43% (22/177) 1.08 0.000712 0.005182
GO:1901682 sulfur compound transmembrane transporter activity 1.13% (2/177) 5.33 0.00097 0.006888
GO:0044425 membrane part 6.21% (11/177) 1.59 0.001122 0.007774
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 1.13% (2/177) 5.06 0.001446 0.009786
GO:1902600 proton transmembrane transport 1.69% (3/177) 3.71 0.001493 0.009873
GO:0005739 mitochondrion 1.13% (2/177) 4.65 0.002664 0.017228
GO:0003674 molecular_function 37.29% (66/177) 0.43 0.003089 0.019123
GO:0071704 organic substance metabolic process 17.51% (31/177) 0.74 0.003082 0.019498
GO:0043170 macromolecule metabolic process 13.56% (24/177) 0.84 0.004016 0.024348
GO:0098660 inorganic ion transmembrane transport 1.69% (3/177) 3.14 0.004655 0.026561
GO:0098662 inorganic cation transmembrane transport 1.69% (3/177) 3.14 0.004655 0.026561
GO:0098655 cation transmembrane transport 1.69% (3/177) 3.14 0.004655 0.026561
GO:0099023 tethering complex 1.13% (2/177) 4.19 0.005131 0.028714
GO:0008152 metabolic process 20.34% (36/177) 0.61 0.006009 0.032379
GO:0015672 monovalent inorganic cation transport 1.69% (3/177) 3.02 0.005914 0.032471
GO:0034220 ion transmembrane transport 1.69% (3/177) 2.98 0.006374 0.033726
GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity 0.56% (1/177) 6.65 0.009977 0.042695
GO:0008521 acetyl-CoA transmembrane transporter activity 0.56% (1/177) 6.65 0.009977 0.042695
GO:0005801 cis-Golgi network 0.56% (1/177) 6.65 0.009977 0.042695
GO:0015935 small ribosomal subunit 0.56% (1/177) 6.65 0.009977 0.042695
GO:0006784 heme a biosynthetic process 0.56% (1/177) 6.65 0.009977 0.042695
GO:0046160 heme a metabolic process 0.56% (1/177) 6.65 0.009977 0.042695
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain 0.56% (1/177) 6.65 0.009977 0.042695
GO:0000314 organellar small ribosomal subunit 0.56% (1/177) 6.65 0.009977 0.042695
GO:0042887 amide transmembrane transporter activity 0.56% (1/177) 6.65 0.009977 0.042695
GO:0005763 mitochondrial small ribosomal subunit 0.56% (1/177) 6.65 0.009977 0.042695
GO:0051184 cofactor transmembrane transporter activity 0.56% (1/177) 6.65 0.009977 0.042695
GO:0051185 coenzyme transmembrane transporter activity 0.56% (1/177) 6.65 0.009977 0.042695
GO:0044237 cellular metabolic process 15.25% (27/177) 0.7 0.008262 0.042935
GO:0044446 intracellular organelle part 3.95% (7/177) 1.55 0.010248 0.04322
GO:0044422 organelle part 3.95% (7/177) 1.54 0.010695 0.04446
GO:0006807 nitrogen compound metabolic process 14.69% (26/177) 0.67 0.011487 0.047083
GO:0008610 lipid biosynthetic process 1.69% (3/177) 2.65 0.012155 0.049128
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_99 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_208 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_188 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_47 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_70 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_153 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_191 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_195 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_30 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_136 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.042 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_81 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_87 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.053 Archaeplastida Compare
Oryza sativa HCCA Cluster_125 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_164 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_333 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_154 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.022 Archaeplastida Compare
Sequences (177) (download table)

InterPro Domains

GO Terms

Family Terms