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  5. Cre06.g264400

Cre06.g264400


Description : Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component


Gene families : OG0002623 (Archaeplastida) Phylogenetic Tree(s): OG0002623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g264400
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT3G52250 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
GSVIVT01016309001 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
Gb_00676 No alias component PWR of HDA9-PWR deacetylation complex 0.01 Archaeplastida
Gb_13421 No alias component PWR of HDA9-PWR deacetylation complex 0.02 Archaeplastida
LOC_Os05g03550.1 No alias component PWR of HDA9-PWR deacetylation complex 0.03 Archaeplastida
MA_10428429g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_104862g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.02 Archaeplastida
MA_14319g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.02 Archaeplastida
Pp3c11_8780V3.1 No alias Duplicated homeodomain-like superfamily protein 0.01 Archaeplastida
Pp3c11_8790V3.1 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c12_21290V3.1 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c12_21500V3.1 No alias Duplicated homeodomain-like superfamily protein 0.01 Archaeplastida
Pp3c4_6990V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c4_7100V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c7_16800V3.1 No alias Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
Zm00001e027573_P003 No alias component PWR of HDA9-PWR deacetylation complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009187 cyclic nucleotide metabolic process IEP Neighborhood
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016849 phosphorus-oxygen lyase activity IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 2198 2241
No external refs found!