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  5. AMTR_s00049p00103990

AMTR_s00049p00103990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.79

No description available


Gene families : OG0000997 (Archaeplastida) Phylogenetic Tree(s): OG0000997_tree ,
OG_05_0000601 (LandPlants) Phylogenetic Tree(s): OG_05_0000601_tree ,
OG_06_0000347 (SeedPlants) Phylogenetic Tree(s): OG_06_0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00103990

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00217540 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00007p00156040 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00011p00223810 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00015p00249640 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00021p00250060 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00023p00214690 No alias No description available 0.03 Archaeplastida
AMTR_s00026p00106470 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00039p00159020 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00039p00159070 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00045p00056980 No alias No description available 0.05 Archaeplastida
AMTR_s00047p00187680 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00047p00228080 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00071p00185000 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00088p00180620 No alias No description available 0.03 Archaeplastida
AMTR_s00096p00114660 No alias No description available 0.06 Archaeplastida
AMTR_s00103p00152270 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00108p00146880 No alias No description available 0.04 Archaeplastida
AMTR_s00109p00088630 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00130p00118290 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00152p00069420 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00164p00038360 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00174p00067570 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s05591p00003960 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR004332 Transposase_MuDR 112 170
IPR018289 MULE_transposase_dom 209 245
No external refs found!