AT1G50640 (ATERF3, ERF3)

Aliases : ATERF3, ERF3

Description : ethylene responsive element binding factor 3

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G50640
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00111p00113030	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.03	Archaeplastida
GSVIVT01009007001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01019860001	No alias	External stimuli response.temperature.ICE-CBF cold...	0.03	Archaeplastida
GSVIVT01020584001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01021098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028050001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031387001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_00125	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01211	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01215	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_24321	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26667	No alias	transcription factor (ERF)	0.07	Archaeplastida
Gb_29263	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_35015	No alias	transcription factor (ERF)	0.1	Archaeplastida
Gb_35633	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os02g06330.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
LOC_Os03g08500.2	No alias	no hits & (original description: none)	0.06	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.02	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os04g57340.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g39590.3	No alias	Dehydration-responsive element-binding protein 2D...	0.04	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g47590.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10020434g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.07	Archaeplastida
MA_10432800g0010	No alias	transcription factor (ERF)	0.1	Archaeplastida
MA_10433310g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_108992g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_120531g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_19532g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_23271g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_269802g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_33394g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5280013g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5805979g0010	No alias	Ethylene-responsive transcription factor 1A...	0.04	Archaeplastida
MA_7960347g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_914123g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_928517g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_938274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_94228g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp6g04880.1	No alias	Ethylene-responsive transcription factor ERF008...	0.03	Archaeplastida
Mp7g00860.1	No alias	transcription factor (DREB)	0.07	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Pp3c26_14710V3.1	No alias	ethylene responsive element binding factor 1	0.01	Archaeplastida
Pp3c27_1350V3.1	No alias	ERF domain protein 12	0.04	Archaeplastida
Pp3c4_2660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c9_2020V3.1	No alias	erf domain protein 9	0.05	Archaeplastida
Smo68470	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Solyc03g093560.1.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc04g072900.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc05g052050.1.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc07g054220.1.1	No alias	transcription factor (DREB)	0.11	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc11g012980.1.1	No alias	Ethylene-responsive transcription factor ERF012...	0.04	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc12g008350.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e013927_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e023159_P001	No alias	transcription factor (DREB)	0.06	Archaeplastida
Zm00001e024001_P001	No alias	no hits & (original description: none)	0.08	Archaeplastida
Zm00001e025064_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e026989_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e031438_P002	No alias	Ethylene-responsive transcription factor RAP2-3...	0.04	Archaeplastida
Zm00001e034242_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e038525_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
Zm00001e041532_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e041539_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	TAS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	IC	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009414	response to water deprivation	RCA	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010104	regulation of ethylene-activated signaling pathway	None	Extended
BP	GO:0010105	negative regulation of ethylene-activated signaling pathway	TAS	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042538	hyperosmotic salinity response	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045892	negative regulation of transcription, DNA-templated	IDA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070297	regulation of phosphorelay signal transduction system	None	Extended
BP	GO:0070298	negative regulation of phosphorelay signal transduction system	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902532	negative regulation of intracellular signal transduction	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0004702	obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0006007	glucose catabolic process	IEP	Neighborhood
BP	GO:0006417	regulation of translation	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006487	protein N-linked glycosylation	IEP	Neighborhood
BP	GO:0009268	response to pH	IEP	Neighborhood
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009838	abscission	IEP	Neighborhood
BP	GO:0009873	ethylene-activated signaling pathway	IEP	Neighborhood
BP	GO:0010118	stomatal movement	IEP	Neighborhood
BP	GO:0010227	floral organ abscission	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
BP	GO:0019320	hexose catabolic process	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0019722	calcium-mediated signaling	IEP	Neighborhood
BP	GO:0019932	second-messenger-mediated signaling	IEP	Neighborhood
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0045727	positive regulation of translation	IEP	Neighborhood
BP	GO:0046365	monosaccharide catabolic process	IEP	Neighborhood
BP	GO:0046685	response to arsenic-containing substance	IEP	Neighborhood
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051865	protein autoubiquitination	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	28	76

External Links

No external refs found!

AT1G50640 (ATERF3, ERF3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation