- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana
Gene families : OG0000233 (Archaeplastida) Phylogenetic Tree(s): OG0000233_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre07.g330300 | |
| Cluster | HCCA: Cluster_83 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G58470 | RBP1, ATRBP1 | RNA-binding protein 1 | 0.02 | Archaeplastida | |
| AT3G13224 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.01 | Archaeplastida | |
| AT4G14300 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
| AT5G55550 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00001130.27 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| LOC_Os08g23120.1 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| LOC_Os08g38410.1 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.01 | Archaeplastida | |
| Pp3c4_17570V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
| Solyc04g014820.4.1 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006020 | inositol metabolic process | IEP | Neighborhood |
| BP | GO:0006021 | inositol biosynthetic process | IEP | Neighborhood |
| BP | GO:0006066 | alcohol metabolic process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
| BP | GO:0019751 | polyol metabolic process | IEP | Neighborhood |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Neighborhood |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
| No external refs found! |