1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00049p00214620

AMTR_s00049p00214620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.247

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00214620
Cluster HCCA: Cluster_13

ico"> Zm00001e017516_P001
Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00111p00051610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.03 Archaeplastida
AT1G71450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G80580 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT3G20310 ERF7, ATERF7, ATERF-7 ethylene response factor 7 0.02 Archaeplastida
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.02 Archaeplastida
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G25490 DREB1B, ATCBF1, CBF1 C-repeat/DRE binding factor 1 0.01 Archaeplastida
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G50080 ERF110 ethylene response factor 110 0.02 Archaeplastida
Cre16.g649433 No alias No description available 0.01 Archaeplastida
GSVIVT01006277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01014291001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01017315001 No alias Cell wall.cutin and suberin.biosynthesis... 0.04 Archaeplastida
GSVIVT01031388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.01 Archaeplastida
GSVIVT01033793001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01035852001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
Gb_02790 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_11856 No alias Ethylene-responsive transcription factor RAP2-3... 0.01 Archaeplastida
Gb_19320 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_23870 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_29220 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os01g10370.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os01g12440.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os01g73770.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
LOC_Os02g13710.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g38090.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g43820.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46240.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46400.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os04g57340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g49010.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os06g08340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os06g10780.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os07g12510.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os07g42510.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os07g47330.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os12g39330.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
MA_10430231g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
MA_10431706g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_137148g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_3758g0010 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
MA_647924g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_99821g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
Mp5g02590.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Pp3c1_7740V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c26_14710V3.1 No alias ethylene responsive element binding factor 1 0.03 Archaeplastida
Smo38494 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
Solyc01g067540.2.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc02g077840.2.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc03g006320.1.1 No alias transcription factor (ERF) 0.01 Archaeplastida
Solyc03g117230.1.1 No alias Ethylene-responsive transcription factor ERF084... 0.04 Archaeplastida
Solyc05g050830.3.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc06g051840.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc11g012980.1.1 No alias Ethylene-responsive transcription factor ERF012... 0.02 Archaeplastida
Solyc12g008350.3.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e001139_P001 No alias Ethylene-responsive transcription factor ERF014... 0.02 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.03 Archaeplastida
Zm00001e006139_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e006604_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014008_P002 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e019026_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e022864_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.02 Archaeplastida
Zm00001e023804_P001 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
Zm00001e026192_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e027350_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e030279_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030585_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Zm00001e031438_P002 No alias Ethylene-responsive transcription factor RAP2-3... 0.02 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.02 Archaeplastida
Zm00001e032032_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e033965_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e035811_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e035837_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Zm00001e040124_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 32 81
No external refs found!