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  4. Sequence
  5. Cre07.g332800

Cre07.g332800


No description available


Gene families : OG0005354 (Archaeplastida) Phylogenetic Tree(s): OG0005354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g332800
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT1G63810 No alias CONTAINS InterPro DOMAIN/s: Nrap protein... 0.08 Archaeplastida
GSVIVT01018952001 No alias No description available 0.07 Archaeplastida
Gb_07104 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.02 Archaeplastida
LOC_Os12g06910.1 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.08 Archaeplastida
MA_10427874g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_10436389g0010 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.03 Archaeplastida
Mp6g08990.1 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.07 Archaeplastida
Pp3c6_25920V3.1 No alias No annotation 0.03 Archaeplastida
Smo407792 No alias No description available 0.03 Archaeplastida
Solyc02g085230.3.1 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.06 Archaeplastida
Zm00001e018445_P001 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR035368 Nrap_D3 625 773
IPR035371 Nrap_D6 1345 1450
IPR035369 Nrap_D4 804 956
IPR035082 Nrap_D1 213 371
IPR035367 Nrap_D2 382 570
IPR035370 Nrap_D5 1027 1166
No external refs found!