Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.263
Description : Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.pachytene checkpoint protein (PCH2/CRC1)
Gene families : OG0005483 (Archaeplastida) Phylogenetic Tree(s): OG0005483_tree ,
OG_05_0006226 (LandPlants) Phylogenetic Tree(s): OG_05_0006226_tree ,
OG_06_0005739 (SeedPlants) Phylogenetic Tree(s): OG_06_0005739_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00049p00222420 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os04g40290.1 | No alias | meiotic crossover pachytene checkpoint protein (PCH2/CRC1) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
BP | GO:0000910 | cytokinesis | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Neighborhood |
BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
BP | GO:0006771 | riboflavin metabolic process | IEP | Neighborhood |
BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
MF | GO:0008017 | microtubule binding | IEP | Neighborhood |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
MF | GO:0008531 | riboflavin kinase activity | IEP | Neighborhood |
MF | GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity | IEP | Neighborhood |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Neighborhood |
MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
MF | GO:0016597 | amino acid binding | IEP | Neighborhood |
MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Neighborhood |
BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
MF | GO:0031406 | carboxylic acid binding | IEP | Neighborhood |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Neighborhood |
MF | GO:0043177 | organic acid binding | IEP | Neighborhood |
MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003959 | ATPase_AAA_core | 191 | 336 |
No external refs found! |