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  5. AMTR_s00049p00229270

AMTR_s00049p00229270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.277

Description : GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana


Gene families : OG0000359 (Archaeplastida) Phylogenetic Tree(s): OG0000359_tree ,
OG_05_0000183 (LandPlants) Phylogenetic Tree(s): OG_05_0000183_tree ,
OG_06_0001760 (SeedPlants) Phylogenetic Tree(s): OG_06_0001760_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00229270
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT1G54790 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT1G67830 FXG1, ATFXG1 alpha-fucosidase 1 0.09 Archaeplastida
GSVIVT01000005001 No alias GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000006001 No alias GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000007001 No alias GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000546001 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000547001 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031290001 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01032373001 No alias GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01032473001 No alias GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_07749 No alias GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_11296 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_15494 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_23543 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_27654 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g22640.1 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g22660.1 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g39750.1 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_10061167g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10171864g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426064g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_42044g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_5042g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g22200.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g02160.1 No alias Alpha-L-fucosidase 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g07250.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c1_17870V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Archaeplastida
Smo411673 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo90062 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g100930.3.1 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc05g013680.3.1 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc05g013690.4.1 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 37 367
No external refs found!