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  5. AMTR_s00050p00214060

AMTR_s00050p00214060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00050.77

No description available


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00050p00214060
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00146080 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00101p00133980 evm_27.TU.AmTr_v1... Disease resistance protein RFL1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.04 Archaeplastida
GSVIVT01001564001 No alias Probable disease resistance protein At1g12290... 0.05 Archaeplastida
GSVIVT01017264001 No alias No description available 0.03 Archaeplastida
GSVIVT01017267001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01038386001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01038402001 No alias Probable disease resistance protein At4g14610... 0.03 Archaeplastida
Gb_15875 No alias Putative disease resistance protein At4g10780... 0.03 Archaeplastida
Gb_37091 No alias Probable disease resistance protein At1g15890... 0.03 Archaeplastida
LOC_Os09g14060.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g29090.1 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 Archaeplastida
MA_10062820g0010 No alias Probable disease resistance protein At1g61300... 0.04 Archaeplastida
MA_10432222g0010 No alias No annotation 0.03 Archaeplastida
MA_10436967g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10437210g0010 No alias Probable disease resistance protein At5g43730... 0.04 Archaeplastida
MA_125257g0010 No alias Probable disease resistance protein At4g27220... 0.03 Archaeplastida
MA_14682g0010 No alias Probable disease resistance protein At4g27220... 0.03 Archaeplastida
MA_194625g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_31174g0010 No alias Probable disease resistance protein At1g61190... 0.06 Archaeplastida
MA_44026g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_7058180g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9388679g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g037540.3.1 No alias Probable disease resistance protein At4g27220... 0.06 Archaeplastida
Solyc08g013970.3.1 No alias Probable disease resistance protein At4g27220... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 18 55
No external refs found!