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  5. Cre08.g385350

Cre08.g385350


No description available


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g385350
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00086450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
AMTR_s00024p00227390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00058p00216470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
AMTR_s00065p00077750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
AMTR_s00101p00022740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
AMTR_s02210p00008540 evm_27.TU.AmTr_v1... AP2-like ethylene-responsive transcription factor... 0.01 Archaeplastida
AT1G51190 PLT2 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G72570 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT2G28550 RAP2.7, TOE1 related to AP2.7 0.02 Archaeplastida
AT3G20840 PLT1 Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT5G10510 PLT3, AIL6 AINTEGUMENTA-like 6 0.01 Archaeplastida
AT5G17430 BBM Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G67180 TOE3 target of early activation tagged (EAT) 3 0.07 Archaeplastida
GSVIVT01016097001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01016352001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_18560 No alias transcription factor (AP2) 0.01 Archaeplastida
Gb_24420 No alias transcription factor (AP2) 0.01 Archaeplastida
Gb_29561 No alias transcription factor (AP2) 0.01 Archaeplastida
LOC_Os01g59780.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os01g67410.1 No alias transcription factor (AP2) 0.01 Archaeplastida
LOC_Os02g40070.1 No alias transcription factor (AP2) 0.01 Archaeplastida
LOC_Os03g07940.1 No alias transcription factor (AP2) 0.01 Archaeplastida
LOC_Os03g12950.1 No alias no description available(sp|q84z02|crl5_orysj : 102.0) 0.02 Archaeplastida
LOC_Os03g19900.1 No alias transcription factor (AP2) 0.01 Archaeplastida
LOC_Os03g56050.1 No alias transcription factor (AP2) 0.01 Archaeplastida
LOC_Os06g43220.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os06g44750.1 No alias transcription factor (AP2) 0.01 Archaeplastida
LOC_Os07g03250.1 No alias transcription factor (AP2) 0.01 Archaeplastida
LOC_Os07g13170.2 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os08g34360.1 No alias transcription factor (AP2) 0.01 Archaeplastida
LOC_Os11g19060.1 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_113625g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_196219g0010 No alias transcription factor (AP2) 0.01 Archaeplastida
MA_86195g0010 No alias transcription factor (AP2) 0.01 Archaeplastida
MA_98095g0010 No alias transcription factor (AP2) 0.01 Archaeplastida
Mp7g13270.1 No alias transcription factor (AP2) 0.01 Archaeplastida
Smo419668 No alias No description available 0.01 Archaeplastida
Solyc01g096860.3.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc02g092050.3.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc03g044300.3.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc03g117720.3.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc03g123430.4.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc04g077490.3.1 No alias transcription factor (AP2) 0.01 Archaeplastida
Solyc05g051380.4.1 No alias transcription factor (AP2) 0.05 Archaeplastida
Solyc11g008560.2.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc11g010710.2.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e005817_P003 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e006752_P001 No alias transcription factor (AP2) 0.01 Archaeplastida
Zm00001e024044_P002 No alias transcription factor (AP2) 0.01 Archaeplastida
Zm00001e027593_P003 No alias transcription factor (AP2) 0.04 Archaeplastida
Zm00001e032754_P003 No alias transcription factor (AP2) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 51 99
No external refs found!