Cre09.g391652


Description : Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana


Gene families : OG0002701 (Archaeplastida) Phylogenetic Tree(s): OG0002701_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g391652
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00038010 evm_27.TU.AmTr_v1... Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00032p00060700 evm_27.TU.AmTr_v1... Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G18220 No alias Noc2p family 0.14 Archaeplastida
AT3G55510 RBL Noc2p family 0.18 Archaeplastida
Cpa|evm.model.tig00020610.71 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01016319001 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.11 Archaeplastida
GSVIVT01037396001 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os10g35280.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.08 Archaeplastida
LOC_Os12g06610.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.07 Archaeplastida
MA_4449473g0010 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.02 Archaeplastida
MA_57096g0010 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.03 Archaeplastida
MA_9980g0020 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.01 Archaeplastida
Mp1g23860.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.2 Archaeplastida
Pp3c24_4150V3.1 No alias Noc2p family 0.14 Archaeplastida
Smo144099 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g081680.4.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.15 Archaeplastida
Solyc05g023710.3.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.02 Archaeplastida
Zm00001e009196_P001 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.11 Archaeplastida
Zm00001e012606_P001 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Neighborhood
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0030488 tRNA methylation IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0034457 Mpp10 complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0034708 methyltransferase complex IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0043527 tRNA methyltransferase complex IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044452 nucleolar part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005343 Noc2 489 795
No external refs found!