1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00051p00177750

AMTR_s00051p00177750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00051.70

No description available


Gene families : OG0000400 (Archaeplastida) Phylogenetic Tree(s): OG0000400_tree ,
OG_05_0000199 (LandPlants) Phylogenetic Tree(s): OG_05_0000199_tree ,
OG_06_0000082 (SeedPlants) Phylogenetic Tree(s): OG_06_0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00051p00177750
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00269080 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00015p00059040 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00034p00047290 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00034p00047350 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00035p00192640 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00050p00224980 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00054p00218090 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00083p00122040 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00121p00041090 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 33 78
No external refs found!