Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component
Gene families : OG0002284 (Archaeplastida) Phylogenetic Tree(s): OG0002284_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre10.g417700 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00269670 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | Archaeplastida | |
AMTR_s00060p00174830 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | Archaeplastida | |
AMTR_s00135p00091990 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | Archaeplastida | |
AT1G43170 | RP1, RPL3A, emb2207, ARP1 | ribosomal protein 1 | 0.11 | Archaeplastida | |
AT1G61580 | RPL3B, ARP2 | R-protein L3 B | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00000025.50 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | Archaeplastida | |
GSVIVT01023241001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
GSVIVT01034555001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | Archaeplastida | |
Gb_35746 | No alias | component RPL3 of LSU proteome component | 0.07 | Archaeplastida | |
LOC_Os11g06750.1 | No alias | component RPL3 of LSU proteome component | 0.09 | Archaeplastida | |
LOC_Os12g07010.1 | No alias | component RPL3 of LSU proteome component | 0.15 | Archaeplastida | |
MA_10432758g0010 | No alias | component RPL3 of LSU proteome component | 0.12 | Archaeplastida | |
MA_124178g0010 | No alias | component RPL3 of LSU proteome component | 0.12 | Archaeplastida | |
Mp1g18990.1 | No alias | component RPL3 of LSU proteome component | 0.17 | Archaeplastida | |
Pp3c10_25460V3.1 | No alias | R-protein L3 B | 0.17 | Archaeplastida | |
Pp3c5_27000V3.1 | No alias | R-protein L3 B | 0.1 | Archaeplastida | |
Pp3c5_27030V3.1 | No alias | R-protein L3 B | 0.04 | Archaeplastida | |
Smo270706 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | Archaeplastida | |
Solyc01g103510.4.1 | No alias | component RPL3 of LSU proteome component | 0.04 | Archaeplastida | |
Solyc01g104590.3.1 | No alias | component RPL3 of LSU proteome component | 0.18 | Archaeplastida | |
Zm00001e001224_P002 | No alias | component RPL3 of LSU proteome component | 0.08 | Archaeplastida | |
Zm00001e008122_P001 | No alias | component RPL3 of LSU proteome component | 0.07 | Archaeplastida | |
Zm00001e008127_P001 | No alias | component RPL3 of LSU proteome component | 0.1 | Archaeplastida | |
Zm00001e009061_P001 | No alias | component RPL3 of LSU proteome component | 0.07 | Archaeplastida | |
Zm00001e009065_P002 | No alias | component RPL3 of LSU proteome component | 0.11 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005622 | intracellular | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000597 | Ribosomal_L3 | 1 | 367 |
No external refs found! |