Coexpression cluster: Cluster_35 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 40.32% (25/62) 5.9 0.0 0.0
GO:0043043 peptide biosynthetic process 40.32% (25/62) 5.87 0.0 0.0
GO:0006412 translation 40.32% (25/62) 5.92 0.0 0.0
GO:0006518 peptide metabolic process 40.32% (25/62) 5.84 0.0 0.0
GO:0043604 amide biosynthetic process 40.32% (25/62) 5.79 0.0 0.0
GO:0005198 structural molecule activity 40.32% (25/62) 5.78 0.0 0.0
GO:0043603 cellular amide metabolic process 40.32% (25/62) 5.75 0.0 0.0
GO:0005840 ribosome 38.71% (24/62) 5.9 0.0 0.0
GO:1990904 ribonucleoprotein complex 40.32% (25/62) 5.71 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 38.71% (24/62) 5.71 0.0 0.0
GO:0043228 non-membrane-bounded organelle 38.71% (24/62) 5.71 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 40.32% (25/62) 5.27 0.0 0.0
GO:0044444 cytoplasmic part 41.94% (26/62) 5.02 0.0 0.0
GO:0009059 macromolecule biosynthetic process 40.32% (25/62) 5.14 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 40.32% (25/62) 4.89 0.0 0.0
GO:0043229 intracellular organelle 38.71% (24/62) 4.75 0.0 0.0
GO:0043226 organelle 38.71% (24/62) 4.75 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 40.32% (25/62) 4.22 0.0 0.0
GO:0032991 protein-containing complex 40.32% (25/62) 3.96 0.0 0.0
GO:0044249 cellular biosynthetic process 40.32% (25/62) 3.87 0.0 0.0
GO:1901576 organic substance biosynthetic process 40.32% (25/62) 3.82 0.0 0.0
GO:0044464 cell part 43.55% (27/62) 3.58 0.0 0.0
GO:0044424 intracellular part 41.94% (26/62) 3.61 0.0 0.0
GO:0009058 biosynthetic process 40.32% (25/62) 3.7 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 40.32% (25/62) 3.38 0.0 0.0
GO:0044267 cellular protein metabolic process 41.94% (26/62) 3.11 0.0 0.0
GO:0005622 intracellular 20.97% (13/62) 5.43 0.0 0.0
GO:0019538 protein metabolic process 41.94% (26/62) 2.87 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 41.94% (26/62) 2.84 0.0 0.0
GO:0005575 cellular_component 43.55% (27/62) 2.64 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 41.94% (26/62) 2.63 0.0 0.0
GO:0043170 macromolecule metabolic process 41.94% (26/62) 2.46 0.0 0.0
GO:0006807 nitrogen compound metabolic process 41.94% (26/62) 2.19 0.0 0.0
GO:0044237 cellular metabolic process 41.94% (26/62) 2.16 0.0 0.0
GO:0009987 cellular process 43.55% (27/62) 2.0 0.0 0.0
GO:0044238 primary metabolic process 41.94% (26/62) 2.05 0.0 0.0
GO:0071704 organic substance metabolic process 41.94% (26/62) 2.0 0.0 0.0
GO:0008152 metabolic process 46.77% (29/62) 1.81 0.0 0.0
GO:0008150 biological_process 50.0% (31/62) 1.48 0.0 0.0
GO:0003674 molecular_function 56.45% (35/62) 1.03 2e-06 4e-06
GO:0003723 RNA binding 9.68% (6/62) 3.55 1.2e-05 2.7e-05
GO:0019843 rRNA binding 3.23% (2/62) 6.35 0.00025 0.000535
GO:0018199 peptidyl-glutamine modification 1.61% (1/62) 8.16 0.003495 0.006419
GO:0016603 glutaminyl-peptide cyclotransferase activity 1.61% (1/62) 8.16 0.003495 0.006419
GO:0008097 5S rRNA binding 1.61% (1/62) 8.16 0.003495 0.006419
GO:0009306 protein secretion 1.61% (1/62) 8.16 0.003495 0.006419
GO:0005788 endoplasmic reticulum lumen 1.61% (1/62) 8.16 0.003495 0.006419
GO:0002790 peptide secretion 1.61% (1/62) 8.16 0.003495 0.006419
GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase 1.61% (1/62) 8.16 0.003495 0.006419
GO:0015934 large ribosomal subunit 1.61% (1/62) 6.58 0.010448 0.018807
GO:0043233 organelle lumen 1.61% (1/62) 6.16 0.013907 0.022757
GO:0016755 transferase activity, transferring amino-acyl groups 1.61% (1/62) 6.16 0.013907 0.022757
GO:0031974 membrane-enclosed lumen 1.61% (1/62) 6.16 0.013907 0.022757
GO:0070013 intracellular organelle lumen 1.61% (1/62) 6.16 0.013907 0.022757
GO:0044391 ribosomal subunit 1.61% (1/62) 6.16 0.013907 0.022757
GO:0032940 secretion by cell 1.61% (1/62) 5.84 0.017354 0.027401
GO:0046903 secretion 1.61% (1/62) 5.84 0.017354 0.027401
GO:0003676 nucleic acid binding 9.68% (6/62) 1.44 0.022704 0.035229
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.061 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.092 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_74 0.033 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.035 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.287 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.042 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.135 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.058 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_245 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_265 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.248 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.124 Archaeplastida Compare
Gingko biloba HCCA Cluster_212 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.044 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.061 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.312 Archaeplastida Compare
Zea mays HCCA Cluster_243 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.072 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.273 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_94 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.204 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.131 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.12 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.189 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_250 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_257 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_270 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.044 Archaeplastida Compare
Picea abies HCCA Cluster_90 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_199 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.139 Archaeplastida Compare
Picea abies HCCA Cluster_229 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_406 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_41 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.254 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.119 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.058 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_166 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.071 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.273 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.053 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.052 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.096 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.065 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.155 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.078 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.127 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.053 Archaeplastida Compare
Vitis vinifera HCCA Cluster_200 0.023 Archaeplastida Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms