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  5. Cre10.g423800

Cre10.g423800


No description available


Gene families : OG0004038 (Archaeplastida) Phylogenetic Tree(s): OG0004038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g423800
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g63920.1 No alias component KU80 of Ku70-Ku80 helicase complex 0.02 Archaeplastida
MA_10432469g0010 No alias ATP-dependent DNA helicase 2 subunit KU80 OS=Oryza... 0.02 Archaeplastida
MA_10435542g0010 No alias component KU80 of Ku70-Ku80 helicase complex 0.02 Archaeplastida
MA_159677g0010 No alias ATP-dependent DNA helicase 2 subunit KU80 OS=Oryza... 0.02 Archaeplastida
MA_169473g0010 No alias ATP-dependent DNA helicase 2 subunit KU80 OS=Oryza... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006303 double-strand break repair via nonhomologous end joining IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR014893 Ku_PK_bind 903 999
IPR006164 Ku70/Ku80_beta-barrel_dom 385 628
No external refs found!