Cre10.g461950

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component

Gene families : OG0003488 (Archaeplastida) Phylogenetic Tree(s): OG0003488_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre10.g461950
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00083100	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.20S core...	0.05	Archaeplastida
AT1G13060	PBE1	20S proteasome beta subunit E1	0.19	Archaeplastida
AT3G26340	No alias	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.02	Archaeplastida
Cpa\|evm.model.tig00020554.44	No alias	Protein degradation.26S proteasome.20S core...	0.18	Archaeplastida
GSVIVT01010375001	No alias	Protein degradation.26S proteasome.20S core...	0.05	Archaeplastida
Gb_01835	No alias	component beta type-5 of 26S proteasome	0.06	Archaeplastida
LOC_Os06g06030.1	No alias	component beta type-5 of 26S proteasome	0.18	Archaeplastida
MA_2177g0010	No alias	component beta type-5 of 26S proteasome	0.09	Archaeplastida
MA_5918g0010	No alias	component beta type-5 of 26S proteasome	0.04	Archaeplastida
Mp2g06230.1	No alias	component beta type-5 of 26S proteasome	0.29	Archaeplastida
Pp3c11_2970V3.1	No alias	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.1	Archaeplastida
Solyc05g056160.3.1	No alias	component beta type-5 of 26S proteasome	0.14	Archaeplastida
Zm00001e036472_P001	No alias	component beta type-5 of 26S proteasome	0.13	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Neighborhood
CC	GO:0000502	proteasome complex	IEP	Neighborhood
MF	GO:0003684	damaged DNA binding	IEP	Neighborhood
BP	GO:0006289	nucleotide-excision repair	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
BP	GO:0009894	regulation of catabolic process	IEP	Neighborhood
BP	GO:0010498	proteasomal protein catabolic process	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0030163	protein catabolic process	IEP	Neighborhood
MF	GO:0034450	ubiquitin-ubiquitin ligase activity	IEP	Neighborhood
BP	GO:0042176	regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Neighborhood
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood
CC	GO:1905369	endopeptidase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	58	238

External Links

No external refs found!

Cre10.g461950

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation