Coexpression cluster: Cluster_50 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051603 proteolysis involved in cellular protein catabolic process 34.0% (17/50) 7.7 0.0 0.0
GO:0070003 threonine-type peptidase activity 22.0% (11/50) 8.23 0.0 0.0
GO:0004298 threonine-type endopeptidase activity 22.0% (11/50) 8.23 0.0 0.0
GO:0005839 proteasome core complex 22.0% (11/50) 8.23 0.0 0.0
GO:0006508 proteolysis 36.0% (18/50) 5.21 0.0 0.0
GO:0004175 endopeptidase activity 28.0% (14/50) 5.72 0.0 0.0
GO:0070011 peptidase activity, acting on L-amino acid peptides 32.0% (16/50) 4.94 0.0 0.0
GO:0008233 peptidase activity 32.0% (16/50) 4.88 0.0 0.0
GO:0032991 protein-containing complex 34.0% (17/50) 3.72 0.0 0.0
GO:0044464 cell part 36.0% (18/50) 3.3 0.0 0.0
GO:0044424 intracellular part 34.0% (17/50) 3.3 0.0 0.0
GO:0043632 modification-dependent macromolecule catabolic process 12.0% (6/50) 7.06 0.0 0.0
GO:0006511 ubiquitin-dependent protein catabolic process 12.0% (6/50) 7.06 0.0 0.0
GO:0019941 modification-dependent protein catabolic process 12.0% (6/50) 7.06 0.0 0.0
GO:0140096 catalytic activity, acting on a protein 36.0% (18/50) 2.89 0.0 0.0
GO:0019538 protein metabolic process 38.0% (19/50) 2.73 0.0 0.0
GO:0044265 cellular macromolecule catabolic process 12.0% (6/50) 6.6 0.0 0.0
GO:0009057 macromolecule catabolic process 12.0% (6/50) 6.36 0.0 0.0
GO:0016787 hydrolase activity 32.0% (16/50) 2.94 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 38.0% (19/50) 2.48 0.0 0.0
GO:0043170 macromolecule metabolic process 38.0% (19/50) 2.32 0.0 0.0
GO:0005575 cellular_component 36.0% (18/50) 2.36 0.0 0.0
GO:0044248 cellular catabolic process 12.0% (6/50) 5.2 0.0 0.0
GO:1901575 organic substance catabolic process 12.0% (6/50) 5.13 0.0 0.0
GO:0019773 proteasome core complex, alpha-subunit complex 6.0% (3/50) 8.47 0.0 0.0
GO:0009056 catabolic process 12.0% (6/50) 5.06 0.0 0.0
GO:0006807 nitrogen compound metabolic process 38.0% (19/50) 2.05 0.0 0.0
GO:0044238 primary metabolic process 38.0% (19/50) 1.91 0.0 1e-06
GO:0071704 organic substance metabolic process 38.0% (19/50) 1.85 0.0 2e-06
GO:0003674 molecular_function 60.0% (30/50) 1.12 2e-06 8e-06
GO:0008150 biological_process 46.0% (23/50) 1.36 5e-06 2.2e-05
GO:0008152 metabolic process 38.0% (19/50) 1.51 1.1e-05 5e-05
GO:0003824 catalytic activity 36.0% (18/50) 1.26 0.000208 0.000938
GO:0070647 protein modification by small protein conjugation or removal 6.0% (3/50) 4.5 0.000313 0.001372
GO:0036459 thiol-dependent ubiquitinyl hydrolase activity 4.0% (2/50) 4.95 0.001896 0.007637
GO:0019783 ubiquitin-like protein-specific protease activity 4.0% (2/50) 4.95 0.001896 0.007637
GO:0101005 ubiquitinyl hydrolase activity 4.0% (2/50) 4.95 0.001896 0.007637
GO:0009894 regulation of catabolic process 2.0% (1/50) 8.47 0.002818 0.009129
GO:0010498 proteasomal protein catabolic process 2.0% (1/50) 8.47 0.002818 0.009129
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 2.0% (1/50) 8.47 0.002818 0.009129
GO:0042176 regulation of protein catabolic process 2.0% (1/50) 8.47 0.002818 0.009129
GO:1905369 endopeptidase complex 2.0% (1/50) 8.47 0.002818 0.009129
GO:0000502 proteasome complex 2.0% (1/50) 8.47 0.002818 0.009129
GO:0043461 proton-transporting ATP synthase complex assembly 2.0% (1/50) 8.47 0.002818 0.009129
GO:0016567 protein ubiquitination 4.0% (2/50) 4.66 0.002808 0.010728
GO:0032446 protein modification by small protein conjugation 4.0% (2/50) 4.66 0.002808 0.010728
GO:0061659 ubiquitin-like protein ligase activity 2.0% (1/50) 7.47 0.005629 0.016129
GO:0061630 ubiquitin protein ligase activity 2.0% (1/50) 7.47 0.005629 0.016129
GO:0030163 protein catabolic process 2.0% (1/50) 7.47 0.005629 0.016129
GO:0034450 ubiquitin-ubiquitin ligase activity 2.0% (1/50) 7.47 0.005629 0.016129
GO:0004842 ubiquitin-protein transferase activity 4.0% (2/50) 4.19 0.005397 0.016753
GO:0019787 ubiquitin-like protein transferase activity 4.0% (2/50) 4.19 0.005397 0.016753
GO:0044260 cellular macromolecule metabolic process 16.0% (8/50) 1.45 0.008202 0.02306
GO:0070071 proton-transporting two-sector ATPase complex assembly 2.0% (1/50) 6.89 0.008432 0.023265
GO:0000151 ubiquitin ligase complex 2.0% (1/50) 6.47 0.011227 0.029347
GO:1905368 peptidase complex 2.0% (1/50) 6.47 0.011227 0.029347
GO:0008234 cysteine-type peptidase activity 4.0% (2/50) 3.66 0.01088 0.029474
GO:0006289 nucleotide-excision repair 2.0% (1/50) 6.15 0.014014 0.035391
GO:0051246 regulation of protein metabolic process 2.0% (1/50) 6.15 0.014014 0.035391
GO:0006357 regulation of transcription by RNA polymerase II 2.0% (1/50) 5.89 0.016794 0.040359
GO:0004843 thiol-dependent ubiquitin-specific protease activity 2.0% (1/50) 5.89 0.016794 0.040359
GO:0016592 mediator complex 2.0% (1/50) 5.89 0.016794 0.040359
GO:1902494 catalytic complex 4.0% (2/50) 3.26 0.018479 0.043704
GO:1901565 organonitrogen compound catabolic process 2.0% (1/50) 5.66 0.019566 0.045551
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_75 0.035 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_200 0.165 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_226 0.054 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.041 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_234 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_265 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_267 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.091 Archaeplastida Compare
Gingko biloba HCCA Cluster_234 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_265 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_276 0.101 Archaeplastida Compare
Gingko biloba HCCA Cluster_315 0.064 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.038 Archaeplastida Compare
Zea mays HCCA Cluster_43 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_170 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_258 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.167 Archaeplastida Compare
Zea mays HCCA Cluster_329 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_340 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_346 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_20 0.119 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_142 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.074 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_63 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_99 0.049 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_104 0.057 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_264 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_270 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_298 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_398 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_427 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_451 0.038 Archaeplastida Compare
Picea abies HCCA Cluster_459 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_488 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_500 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_517 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_155 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_164 0.098 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_179 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_307 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.042 Archaeplastida Compare
Oryza sativa HCCA Cluster_341 0.047 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_12 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_116 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_144 0.045 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_163 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_62 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_220 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_256 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_259 0.047 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_274 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_284 0.102 Archaeplastida Compare
Vitis vinifera HCCA Cluster_1 0.155 Archaeplastida Compare
Vitis vinifera HCCA Cluster_119 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.027 Archaeplastida Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms