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  5. Cre12.g494050

Cre12.g494050


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL9 component


Gene families : OG0002651 (Archaeplastida) Phylogenetic Tree(s): OG0002651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g494050
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00131950 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 Archaeplastida
AMTR_s00048p00062300 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
AT1G33120 No alias Ribosomal protein L6 family 0.18 Archaeplastida
AT1G33140 PGY2 Ribosomal protein L6 family 0.26 Archaeplastida
AT4G10450 No alias Ribosomal protein L6 family 0.1 Archaeplastida
Cpa|evm.model.tig00001532.12 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.38 Archaeplastida
GSVIVT01016795001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 Archaeplastida
GSVIVT01038670001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
LOC_Os02g01332.1 No alias component RPL9 of LSU proteome component 0.11 Archaeplastida
LOC_Os09g31180.1 No alias component RPL9 of LSU proteome component 0.32 Archaeplastida
MA_38141g0010 No alias component RPL9 of LSU proteome component 0.2 Archaeplastida
Mp4g24070.1 No alias component RPL9 of LSU proteome component 0.41 Archaeplastida
Pp3c10_8500V3.1 No alias Ribosomal protein L6 family 0.34 Archaeplastida
Pp3c14_8600V3.1 No alias Ribosomal protein L6 family 0.39 Archaeplastida
Pp3c16_20070V3.1 No alias Ribosomal protein L6 family 0.25 Archaeplastida
Pp3c27_8190V3.1 No alias Ribosomal protein L6 family 0.4 Archaeplastida
Smo269009 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Solyc06g073310.3.1 No alias component RPL9 of LSU proteome component 0.38 Archaeplastida
Solyc08g014550.3.1 No alias component RPL9 of LSU proteome component 0.34 Archaeplastida
Solyc12g096700.2.1 No alias component RPL9 of LSU proteome component 0.48 Archaeplastida
Zm00001e025404_P001 No alias component RPL9 of LSU proteome component 0.16 Archaeplastida
Zm00001e029810_P003 No alias component RPL9 of LSU proteome component 0.41 Archaeplastida
Zm00001e036699_P002 No alias component RPL9 of LSU proteome component 0.33 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
InterPro domains Description Start Stop
IPR020040 Ribosomal_L6_a/b-dom 12 88
IPR020040 Ribosomal_L6_a/b-dom 100 179
No external refs found!