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  5. Cre12.g500900

Cre12.g500900


Description : Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO E3 ligase activities.SUMO E3 ligase (SIZ1)


Gene families : OG0001463 (Archaeplastida) Phylogenetic Tree(s): OG0001463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g500900
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001127.10 No alias No description available 0.02 Archaeplastida
GSVIVT01025151001 No alias Protein degradation.peptide... 0.03 Archaeplastida
Gb_39019 No alias SUMO E3 ligase (SIZ1) 0.01 Archaeplastida
LOC_Os05g03430.1 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida
Mp6g08590.1 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida
Pp3c20_14153V3.1 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Archaeplastida
Pp3c8_11400V3.1 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 Archaeplastida
Solyc06g010100.2.1 No alias SUMO E3 ligase (SIZ1) 0.01 Archaeplastida
Solyc11g069160.3.1 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 173 225
IPR004181 Znf_MIZ 412 456
No external refs found!