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Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7a component
Gene families : OG0002306 (Archaeplastida) Phylogenetic Tree(s): OG0002306_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre12.g529651 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00047p00140240 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | Archaeplastida | |
| AT2G47610 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.17 | Archaeplastida | |
| AT3G62870 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.18 | Archaeplastida | |
| Cpa|evm.model.tig00000128.22 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | Archaeplastida | |
| GSVIVT01008585001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | Archaeplastida | |
| GSVIVT01033050001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
| GSVIVT01036540001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
| Gb_36761 | No alias | component RPL7a of LSU proteome component | 0.08 | Archaeplastida | |
| Gb_36922 | No alias | component RPL7a of LSU proteome component | 0.06 | Archaeplastida | |
| LOC_Os08g23710.1 | No alias | component RPL7a of LSU proteome component | 0.09 | Archaeplastida | |
| LOC_Os09g32976.1 | No alias | component RPL7a of LSU proteome component | 0.16 | Archaeplastida | |
| MA_109678g0010 | No alias | component RPL7a of LSU proteome component | 0.12 | Archaeplastida | |
| MA_648702g0010 | No alias | component RPL7a of LSU proteome component | 0.02 | Archaeplastida | |
| Mp2g23250.1 | No alias | component RPL7a of LSU proteome component | 0.15 | Archaeplastida | |
| Mp8g17650.1 | No alias | component RPL7a of LSU proteome component | 0.17 | Archaeplastida | |
| Pp3c13_24420V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.11 | Archaeplastida | |
| Pp3c13_24450V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.08 | Archaeplastida | |
| Pp3c15_290V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.17 | Archaeplastida | |
| Pp3c26_330V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.15 | Archaeplastida | |
| Pp3c26_360V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.19 | Archaeplastida | |
| Pp3c9_380V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.09 | Archaeplastida | |
| Smo270545 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
| Solyc01g097760.3.1 | No alias | component RPL7a of LSU proteome component | 0.03 | Archaeplastida | |
| Solyc06g050120.3.1 | No alias | component RPL7a of LSU proteome component | 0.04 | Archaeplastida | |
| Solyc06g064460.4.1 | No alias | component RPL7a of LSU proteome component | 0.03 | Archaeplastida | |
| Solyc06g064470.4.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Zm00001e003683_P001 | No alias | no hits & (original description: none) | 0.11 | Archaeplastida | |
| Zm00001e010129_P001 | No alias | component RPL7a of LSU proteome component | 0.13 | Archaeplastida | |
| Zm00001e034633_P002 | No alias | component RPL7a of LSU proteome component | 0.12 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 58 | 143 |
| No external refs found! |