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  5. AMTR_s00054p00054050

AMTR_s00054p00054050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00054.22

No description available


Gene families : OG0000428 (Archaeplastida) Phylogenetic Tree(s): OG0000428_tree ,
OG_05_0000219 (LandPlants) Phylogenetic Tree(s): OG_05_0000219_tree ,
OG_06_0000090 (SeedPlants) Phylogenetic Tree(s): OG_06_0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00054p00054050
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00180240 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00044p00183280 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00077p00064360 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00184p00039900 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004020 adenylylsulfate kinase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Neighborhood
BP GO:0009245 lipid A biosynthetic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0046493 lipid A metabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901269 lipooligosaccharide metabolic process IEP Neighborhood
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 15 113
No external refs found!