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  5. AMTR_s00055p00124440

AMTR_s00055p00124440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.52

No description available


Gene families : OG0001212 (Archaeplastida) Phylogenetic Tree(s): OG0001212_tree ,
OG_05_0000743 (LandPlants) Phylogenetic Tree(s): OG_05_0000743_tree ,
OG_06_0000370 (SeedPlants) Phylogenetic Tree(s): OG_06_0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00124440
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00240780 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00006p00264490 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00011p00184340 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00017p00216490 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00017p00234960 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00038p00187280 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00039p00100150 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00055p00213850 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00078p00172460 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00089p00121630 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00140p00041960 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00151p00073080 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!