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  5. AMTR_s00055p00193060

AMTR_s00055p00193060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.128

Description : Cytoskeleton.microfilament network.actin polymerisation.fimbrin actin-crosslinking factor


Gene families : OG0001003 (Archaeplastida) Phylogenetic Tree(s): OG0001003_tree ,
OG_05_0001487 (LandPlants) Phylogenetic Tree(s): OG_05_0001487_tree ,
OG_06_0001278 (SeedPlants) Phylogenetic Tree(s): OG_06_0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00193060
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000881.32 No alias Cytoskeleton.microfilament network.actin... 0.01 Archaeplastida
Gb_01810 No alias fimbrin actin-crosslinking factor 0.02 Archaeplastida
LOC_Os02g37580.1 No alias fimbrin actin-crosslinking factor 0.04 Archaeplastida
MA_10429248g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_168655g0010 No alias fimbrin actin-crosslinking factor 0.02 Archaeplastida
Mp1g27470.1 No alias fimbrin actin-crosslinking factor 0.02 Archaeplastida
Solyc06g083070.3.1 No alias fimbrin actin-crosslinking factor 0.05 Archaeplastida
Solyc07g065080.4.1 No alias fimbrin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e014968_P001 No alias fimbrin actin-crosslinking factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001715 CH-domain 148 237
IPR001715 CH-domain 395 496
IPR001715 CH-domain 270 368
IPR001715 CH-domain 518 619
No external refs found!