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  5. AMTR_s00056p00064760

AMTR_s00056p00064760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.41

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00064760
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT2G44940 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.04 Archaeplastida
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
Gb_07226 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_07475 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_34849 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g43970.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g51670.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os04g46400.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os06g40150.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
LOC_Os08g36920.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os09g39850.1 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_115502g0010 No alias transcription factor (DREB) 0.05 Archaeplastida
MA_47696g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Solyc01g090370.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g066540.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc12g008350.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e006692_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e015327_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e029041_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e031438_P002 No alias Ethylene-responsive transcription factor RAP2-3... 0.04 Archaeplastida
Zm00001e034242_P001 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 61 111
No external refs found!