Cre17.g720050

Description : Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component

Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre17.g720050
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00108310	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.metallopeptidase...	0.03	Archaeplastida
AT1G06430	FTSH8	FTSH protease 8	0.02	Archaeplastida
AT1G50250	FTSH1	FTSH protease 1	0.06	Archaeplastida
AT5G42270	FTSH5, VAR1	FtsH extracellular protease family	0.08	Archaeplastida
Cpa\|evm.model.tig00000704.23	No alias	ATP-dependent zinc metalloprotease FTSH 1, chloroplastic...	0.03	Archaeplastida
GSVIVT01008686001	No alias	ATP-dependent zinc metalloprotease FTSH 1, chloroplastic...	0.05	Archaeplastida
GSVIVT01020760001	No alias	Protein degradation.peptidase families.metallopeptidase...	0.05	Archaeplastida
Gb_06887	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.03	Archaeplastida
Gb_12830	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.06	Archaeplastida
LOC_Os06g45820.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.06	Archaeplastida
LOC_Os06g51029.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.05	Archaeplastida
MA_10435856g0010	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.02	Archaeplastida
MA_188257g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_98203g0010	No alias	No annotation	0.06	Archaeplastida
Mp4g19200.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.03	Archaeplastida
Pp3c12_22830V3.1	No alias	FtsH extracellular protease family	0.07	Archaeplastida
Pp3c20_15780V3.1	No alias	FtsH extracellular protease family	0.03	Archaeplastida
Pp3c23_14665V3.1	No alias	FtsH extracellular protease family	0.04	Archaeplastida
Pp3c23_8400V3.1	No alias	FtsH extracellular protease family	0.06	Archaeplastida
Smo139726	No alias	Protein degradation.peptidase families.metallopeptidase...	0.03	Archaeplastida
Smo149856	No alias	Protein degradation.peptidase families.metallopeptidase...	0.04	Archaeplastida
Smo166773	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.01	Archaeplastida
Solyc03g046340.3.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.03	Archaeplastida
Solyc04g082250.3.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.03	Archaeplastida
Solyc07g055320.4.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.06	Archaeplastida
Zm00001e030153_P001	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.03	Archaeplastida
Zm00001e030358_P003	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.1	Archaeplastida
Zm00001e037753_P001	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004602	glutathione peroxidase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
MF	GO:0008565	protein transporter activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	Neighborhood
BP	GO:0010207	photosystem II assembly	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Neighborhood
MF	GO:0032977	membrane insertase activity	IEP	Neighborhood
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0098809	nitrite reductase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000642	Peptidase_M41	466	654
IPR003959	ATPase_AAA_core	253	384

External Links

No external refs found!

Cre17.g720050

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation