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  5. AMTR_s00056p00141280

AMTR_s00056p00141280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.114

No description available


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00141280
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.02 Archaeplastida
AMTR_s00029p00124200 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00062p00106420 evm_27.TU.AmTr_v1... Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00078p00178260 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00078p00178290 evm_27.TU.AmTr_v1... No description available 0.15 Archaeplastida
AMTR_s00099p00016360 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
AT1G15890 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
GSVIVT01025877001 No alias External stimuli response.biotic stress.pathogen... 0.04 Archaeplastida
Gb_12859 No alias Probable disease resistance protein At4g27220... 0.03 Archaeplastida
LOC_Os03g14900.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g14100.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os11g36410.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10265639g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432222g0010 No alias No annotation 0.06 Archaeplastida
MA_40435g0010 No alias Probable disease resistance protein At1g61310... 0.03 Archaeplastida
MA_85940g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g048910.2.1 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 64 103
No external refs found!