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  5. AMTR_s00057p00042010

AMTR_s00057p00042010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.20

No description available


Gene families : OG0001341 (Archaeplastida) Phylogenetic Tree(s): OG0001341_tree ,
OG_05_0000895 (LandPlants) Phylogenetic Tree(s): OG_05_0000895_tree ,
OG_06_0013652 (SeedPlants) Phylogenetic Tree(s): OG_06_0013652_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00042010
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT3G03280 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
GSVIVT01028106001 No alias No description available 0.07 Archaeplastida
Gb_05758 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_05765 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_05766 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_41646 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os05g47960.1 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_10428693g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_120551g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_24094g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_897390g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9271818g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp3g03220.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g091180.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc03g034410.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g007580.1.1 No alias no hits & (original description: none) 0.13 Archaeplastida
Zm00001e017110_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026461_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 114
No external refs found!