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  5. AMTR_s00057p00183920

AMTR_s00057p00183920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.196

Description : Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase


Gene families : OG0000457 (Archaeplastida) Phylogenetic Tree(s): OG0000457_tree ,
OG_05_0000339 (LandPlants) Phylogenetic Tree(s): OG_05_0000339_tree ,
OG_06_0000237 (SeedPlants) Phylogenetic Tree(s): OG_06_0000237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00183920
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT1G71530 No alias Protein kinase superfamily protein 0.02 Archaeplastida
AT1G74330 No alias Protein kinase superfamily protein 0.04 Archaeplastida
GSVIVT01036431001 No alias Protein modification.phosphorylation.CMGC kinase... 0.02 Archaeplastida
Gb_09473 No alias protein kinase (CDK9) 0.04 Archaeplastida
LOC_Os08g02050.1 No alias protein kinase (CDK9) 0.03 Archaeplastida
LOC_Os11g13860.1 No alias protein kinase (CDK9) 0.03 Archaeplastida
Pp3c15_22150V3.1 No alias Protein kinase superfamily protein 0.04 Archaeplastida
Pp3c9_18620V3.1 No alias Protein kinase superfamily protein 0.03 Archaeplastida
Pp3c9_21750V3.1 No alias Protein kinase superfamily protein 0.02 Archaeplastida
Smo141733 No alias Protein modification.phosphorylation.CMGC kinase... 0.02 Archaeplastida
Solyc02g088330.2.1 No alias protein kinase (CDK9) 0.03 Archaeplastida
Solyc10g008280.3.1 No alias protein kinase (CDK9) 0.02 Archaeplastida
Zm00001e021285_P001 No alias protein kinase (CDK9) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 113 397
No external refs found!