Coexpression cluster: Cluster_233 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030117 membrane coat 8.57% (6/70) 6.67 0.0 0.0
GO:0098796 membrane protein complex 12.86% (9/70) 4.62 0.0 0.0
GO:0051641 cellular localization 11.43% (8/70) 4.81 0.0 0.0
GO:0016192 vesicle-mediated transport 10.0% (7/70) 5.02 0.0 0.0
GO:0006886 intracellular protein transport 10.0% (7/70) 4.97 0.0 0.0
GO:0051649 establishment of localization in cell 10.0% (7/70) 4.83 0.0 0.0
GO:0046907 intracellular transport 10.0% (7/70) 4.83 0.0 0.0
GO:0032991 protein-containing complex 18.57% (13/70) 2.93 0.0 0.0
GO:0044444 cytoplasmic part 15.71% (11/70) 3.3 0.0 0.0
GO:0015031 protein transport 10.0% (7/70) 4.55 0.0 1e-06
GO:0015833 peptide transport 10.0% (7/70) 4.55 0.0 1e-06
GO:0042886 amide transport 10.0% (7/70) 4.55 0.0 1e-06
GO:0008104 protein localization 10.0% (7/70) 4.5 0.0 1e-06
GO:0033036 macromolecule localization 10.0% (7/70) 4.5 0.0 1e-06
GO:0045184 establishment of protein localization 10.0% (7/70) 4.5 0.0 1e-06
GO:0044424 intracellular part 22.86% (16/70) 2.39 0.0 1e-06
GO:0030120 vesicle coat 5.71% (4/70) 6.8 0.0 1e-06
GO:0044433 cytoplasmic vesicle part 5.71% (4/70) 6.8 0.0 1e-06
GO:0071705 nitrogen compound transport 10.0% (7/70) 4.44 0.0 1e-06
GO:0071702 organic substance transport 10.0% (7/70) 4.33 0.0 1e-06
GO:0044464 cell part 24.29% (17/70) 2.22 0.0 1e-06
GO:0005575 cellular_component 31.43% (22/70) 1.77 0.0 2e-06
GO:0044425 membrane part 15.71% (11/70) 2.83 0.0 5e-06
GO:0005488 binding 44.29% (31/70) 1.17 3e-06 3.1e-05
GO:0051179 localization 15.71% (11/70) 2.37 8e-06 9.5e-05
GO:0044422 organelle part 10.0% (7/70) 3.25 9e-06 0.0001
GO:0044446 intracellular organelle part 10.0% (7/70) 3.25 9e-06 0.0001
GO:0005515 protein binding 21.43% (15/70) 1.84 1.4e-05 0.000147
GO:0003674 molecular_function 57.14% (40/70) 0.8 2.6e-05 0.000263
GO:0030126 COPI vesicle coat 2.86% (2/70) 7.61 3.9e-05 0.000382
GO:0044431 Golgi apparatus part 4.29% (3/70) 5.49 4e-05 0.000384
GO:0006810 transport 14.29% (10/70) 2.26 4.2e-05 0.000385
GO:0051234 establishment of localization 14.29% (10/70) 2.25 4.3e-05 0.000389
GO:0008150 biological_process 42.86% (30/70) 0.88 0.000233 0.002029
GO:0044260 cellular macromolecule metabolic process 17.14% (12/70) 1.7 0.000275 0.002326
GO:0003746 translation elongation factor activity 2.86% (2/70) 6.29 0.000288 0.002364
GO:0005198 structural molecule activity 7.14% (5/70) 3.08 0.000321 0.002565
GO:0016462 pyrophosphatase activity 8.57% (6/70) 2.56 0.000544 0.004235
GO:0016817 hydrolase activity, acting on acid anhydrides 8.57% (6/70) 2.52 0.000619 0.004582
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 8.57% (6/70) 2.52 0.000619 0.004582
GO:0042623 ATPase activity, coupled 5.71% (4/70) 3.34 0.000667 0.004704
GO:0006414 translational elongation 2.86% (2/70) 5.7 0.000665 0.004803
GO:0005524 ATP binding 14.29% (10/70) 1.75 0.000737 0.005075
GO:0009987 cellular process 24.29% (17/70) 1.17 0.001013 0.006816
GO:0008144 drug binding 14.29% (10/70) 1.67 0.001101 0.007244
GO:0070035 purine NTP-dependent helicase activity 4.29% (3/70) 3.73 0.001514 0.009334
GO:0008026 ATP-dependent helicase activity 4.29% (3/70) 3.73 0.001514 0.009334
GO:0043170 macromolecule metabolic process 18.57% (13/70) 1.35 0.001485 0.009554
GO:0032559 adenyl ribonucleotide binding 14.29% (10/70) 1.59 0.001639 0.009899
GO:0030554 adenyl nucleotide binding 14.29% (10/70) 1.59 0.001677 0.009926
GO:0035639 purine ribonucleoside triphosphate binding 14.29% (10/70) 1.56 0.001962 0.011388
GO:0044237 cellular metabolic process 20.0% (14/70) 1.22 0.002188 0.012455
GO:0042176 regulation of protein catabolic process 1.43% (1/70) 8.61 0.002563 0.012858
GO:0005798 Golgi-associated vesicle 1.43% (1/70) 8.61 0.002563 0.012858
GO:1905369 endopeptidase complex 1.43% (1/70) 8.61 0.002563 0.012858
GO:0000502 proteasome complex 1.43% (1/70) 8.61 0.002563 0.012858
GO:0031982 vesicle 1.43% (1/70) 8.61 0.002563 0.012858
GO:0097708 intracellular vesicle 1.43% (1/70) 8.61 0.002563 0.012858
GO:0031410 cytoplasmic vesicle 1.43% (1/70) 8.61 0.002563 0.012858
GO:0016887 ATPase activity 5.71% (4/70) 2.8 0.002645 0.013048
GO:0017111 nucleoside-triphosphatase activity 7.14% (5/70) 2.33 0.003204 0.015548
GO:0032555 purine ribonucleotide binding 14.29% (10/70) 1.42 0.00385 0.018382
GO:0017076 purine nucleotide binding 14.29% (10/70) 1.41 0.004002 0.018804
GO:0097159 organic cyclic compound binding 22.86% (16/70) 1.02 0.004221 0.018932
GO:0032553 ribonucleotide binding 14.29% (10/70) 1.41 0.0041 0.018961
GO:1901363 heterocyclic compound binding 22.86% (16/70) 1.02 0.004208 0.019162
GO:0097367 carbohydrate derivative binding 14.29% (10/70) 1.4 0.004341 0.019178
GO:0006464 cellular protein modification process 10.0% (7/70) 1.73 0.005184 0.021613
GO:0036211 protein modification process 10.0% (7/70) 1.73 0.005184 0.021613
GO:0000726 non-recombinational repair 1.43% (1/70) 7.61 0.005119 0.021961
GO:0006303 double-strand break repair via nonhomologous end joining 1.43% (1/70) 7.61 0.005119 0.021961
GO:0008135 translation factor activity, RNA binding 2.86% (2/70) 4.18 0.005463 0.022459
GO:0004386 helicase activity 4.29% (3/70) 3.05 0.005727 0.023224
GO:0006796 phosphate-containing compound metabolic process 10.0% (7/70) 1.67 0.006389 0.025214
GO:0006793 phosphorus metabolic process 10.0% (7/70) 1.67 0.006389 0.025214
GO:1903508 positive regulation of nucleic acid-templated transcription 1.43% (1/70) 7.02 0.007669 0.025223
GO:0030130 clathrin coat of trans-Golgi network vesicle 1.43% (1/70) 7.02 0.007669 0.025223
GO:0009678 hydrogen-translocating pyrophosphatase activity 1.43% (1/70) 7.02 0.007669 0.025223
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1.43% (1/70) 7.02 0.007669 0.025223
GO:0008134 transcription factor binding 1.43% (1/70) 7.02 0.007669 0.025223
GO:0030132 clathrin coat of coated pit 1.43% (1/70) 7.02 0.007669 0.025223
GO:0030125 clathrin vesicle coat 1.43% (1/70) 7.02 0.007669 0.025223
GO:0030118 clathrin coat 1.43% (1/70) 7.02 0.007669 0.025223
GO:0051254 positive regulation of RNA metabolic process 1.43% (1/70) 7.02 0.007669 0.025223
GO:0045893 positive regulation of transcription, DNA-templated 1.43% (1/70) 7.02 0.007669 0.025223
GO:1902680 positive regulation of RNA biosynthetic process 1.43% (1/70) 7.02 0.007669 0.025223
GO:0009894 regulation of catabolic process 1.43% (1/70) 7.02 0.007669 0.025223
GO:0017025 TBP-class protein binding 1.43% (1/70) 7.02 0.007669 0.025223
GO:0043412 macromolecule modification 10.0% (7/70) 1.66 0.00671 0.026133
GO:0004672 protein kinase activity 8.57% (6/70) 1.78 0.008098 0.026342
GO:1901265 nucleoside phosphate binding 14.29% (10/70) 1.26 0.008282 0.026361
GO:0000166 nucleotide binding 14.29% (10/70) 1.26 0.008282 0.026361
GO:0071704 organic substance metabolic process 21.43% (15/70) 0.96 0.008579 0.027015
GO:0015399 primary active transmembrane transporter activity 2.86% (2/70) 3.8 0.00912 0.028119
GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity 2.86% (2/70) 3.8 0.00912 0.028119
GO:0006468 protein phosphorylation 8.57% (6/70) 1.8 0.007454 0.028654
GO:0140096 catalytic activity, acting on a protein 11.43% (8/70) 1.42 0.009674 0.029221
GO:0043168 anion binding 14.29% (10/70) 1.23 0.009663 0.029488
GO:0005853 eukaryotic translation elongation factor 1 complex 1.43% (1/70) 6.61 0.010213 0.03023
GO:0016310 phosphorylation 8.57% (6/70) 1.71 0.010142 0.030323
GO:0006807 nitrogen compound metabolic process 17.14% (12/70) 1.06 0.011153 0.032685
GO:0036094 small molecule binding 14.29% (10/70) 1.19 0.01139 0.033052
GO:0016773 phosphotransferase activity, alcohol group as acceptor 8.57% (6/70) 1.63 0.012912 0.033824
GO:0016301 kinase activity 8.57% (6/70) 1.63 0.012912 0.033824
GO:0042765 GPI-anchor transamidase complex 1.43% (1/70) 6.29 0.01275 0.034
GO:0009891 positive regulation of biosynthetic process 1.43% (1/70) 6.29 0.01275 0.034
GO:0010628 positive regulation of gene expression 1.43% (1/70) 6.29 0.01275 0.034
GO:0031328 positive regulation of cellular biosynthetic process 1.43% (1/70) 6.29 0.01275 0.034
GO:0010604 positive regulation of macromolecule metabolic process 1.43% (1/70) 6.29 0.01275 0.034
GO:0010557 positive regulation of macromolecule biosynthetic process 1.43% (1/70) 6.29 0.01275 0.034
GO:0051173 positive regulation of nitrogen compound metabolic process 1.43% (1/70) 6.29 0.01275 0.034
GO:0006302 double-strand break repair 1.43% (1/70) 6.29 0.01275 0.034
GO:0003676 nucleic acid binding 11.43% (8/70) 1.36 0.012596 0.036198
GO:0031968 organelle outer membrane 1.43% (1/70) 6.02 0.015281 0.038992
GO:0005741 mitochondrial outer membrane 1.43% (1/70) 6.02 0.015281 0.038992
GO:0098805 whole membrane 1.43% (1/70) 6.02 0.015281 0.038992
GO:0006281 DNA repair 2.86% (2/70) 3.4 0.015529 0.039287
GO:0033554 cellular response to stress 2.86% (2/70) 3.36 0.016332 0.040285
GO:0006974 cellular response to DNA damage stimulus 2.86% (2/70) 3.36 0.016332 0.040285
GO:0051716 cellular response to stimulus 2.86% (2/70) 3.36 0.016332 0.040285
GO:0031325 positive regulation of cellular metabolic process 1.43% (1/70) 5.8 0.017805 0.042847
GO:0009893 positive regulation of metabolic process 1.43% (1/70) 5.8 0.017805 0.042847
GO:0030127 COPII vesicle coat 1.43% (1/70) 5.8 0.017805 0.042847
GO:0044267 cellular protein metabolic process 10.0% (7/70) 1.37 0.018601 0.044403
GO:1905368 peptidase complex 1.43% (1/70) 5.61 0.020323 0.047742
GO:0004427 inorganic diphosphatase activity 1.43% (1/70) 5.61 0.020323 0.047742
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_1 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_99 0.063 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_127 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_179 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_259 0.04 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.033 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_265 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_132 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_183 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_73 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_147 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_149 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_155 0.038 Archaeplastida Compare
Gingko biloba HCCA Cluster_213 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_312 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_314 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_318 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_136 0.069 Archaeplastida Compare
Zea mays HCCA Cluster_155 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_170 0.038 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_313 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_354 0.039 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_72 0.054 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_108 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_153 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_158 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_23 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_27 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_59 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_87 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_150 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_221 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_227 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_263 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_51 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_359 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_435 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_483 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_523 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_72 0.045 Archaeplastida Compare
Oryza sativa HCCA Cluster_81 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_157 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_164 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_293 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_315 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.037 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_95 0.053 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_99 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_108 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.047 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_233 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_236 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_259 0.039 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_281 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_54 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_92 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_167 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_180 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_26 0.036 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_166 0.026 Archaeplastida Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms